KEGG   Parvularcula bermudensis: PB2503_01207
Entry
PB2503_01207      CDS       T01298                                 
Name
(GenBank) endopeptidase Clp: ATP-binding subunit B, clpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pbr  Parvularcula bermudensis
Brite
KEGG Orthology (KO) [BR:pbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pbr03110]
    PB2503_01207
Chaperones and folding catalysts [BR:pbr03110]
 Heat shock proteins
  HSP100
   PB2503_01207
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small Clp_N AAA AAA_5 AAA_22 AAA_16 nSTAND3 Sigma54_activat AAA_24 IstB_IS21 RuvB_N Mg_chelatase AAA_7 TniB AAA_23 AAA_14 AAA_25 NACHT AAA_3 T2SSE
Other DBs
NCBI-ProteinID: ADM08321
UniProt: E0TBB7
Position
complement(147281..149944)
AA seq 887 aa
MNFDKYTDRAKGLVQAAQTIAIRENHQQITPFHVLKALLDDSEGLAANLMRRAGGDPDLA
LTAVDQALAKLPTVQGANAQVYMAQPTARIFTQAEDIAKKAGDSYVTAERLLVALALEGE
TAATLKKAGLSPQSLNTAINEIRKGRTADNANAEQGYDALKRYARDLTDAAREGKLDPII
GRDEEIRRAMQILSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPESLKDKRLLALD
LGSLIAGAKYRGEFEERLKAVLSETTSAEGQIILFIDEMHTLVGAGKTDGAMDASNLLKP
ALARGELHCIGATTLDEYRKYVEKDAALARRFQAVFVSEPTVADTISILRGLKEKYELHH
GVRIADSAIVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMAVDSKPEELDALDRQIIQ
MKIEREALLKEDDTASKDRLTDLEKGLAALEERSAELTAAWQAEKEALASTTSVKEELDR
ARQDLVDAERRGDLAKASELKYGQIPALERRLEEAEGRQDADGVNSGLVQEVVDSETIAQ
VVSKWTGIPVDKMLEGERDKLLRMEEVLHSRVIGQEEAVTAVSAAVRRARAGLQDPNRPL
GSFLFLGPTGVGKTELTKALAAFLFDDDQAIARIDMSEFMEKHAVSRLIGAPPGYVGYEE
GGVLTEAVRRRPYQVILFDEVEKAHPDVFNILLQVLDDGRLTDGQGRVVDFKNTIIILTS
NLGAEYMTGLAEGQTVETVREQVMAAVRSAFRPEFLNRLDEIILFSRLERDQMGGIVDIQ
IARLQSLLDDRKIVIEIDDAARQWLAQSGYDPAFGARPLKRVIQKAVQDPLAERLLAGRI
SDGATLHLSADDTGLILDGEHLTSRKAFSLGTVPTSDAGSPPTHMLN
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgaattttgacaaatacacggaccgcgccaagggcctggtccaggcggcgcagaccatt
gcgatccgggaaaatcaccagcagattacgcccttccacgttctgaaggcattgcttgac
gacagtgaagggcttgcggcgaatctgatgcgccgtgccgggggcgaccctgatctggcg
cttaccgccgtcgatcaggcattggcaaaattgccgaccgttcaaggggcgaacgcacag
gtctatatggcccagcccaccgcccgtatttttacccaggccgaggatatcgcgaaaaag
gcgggcgacagctatgtcaccgcagagcgtctactcgtcgctctggcgcttgagggggaa
acggcggcgaccttgaaaaaggcggggctgtcccctcaatcactcaatacagccatcaat
gaaatccgcaaaggtcgtacagcggataatgcgaatgcggagcagggatatgacgcgctc
aaacgctatgcgcgtgatcttaccgacgccgcgcgcgaagggaagctcgatccgatcatc
ggccgtgacgaagaaatccgccgagccatgcaaatcctgtcccgccgtaccaagaacaac
cccgttctgatcggtgaaccgggggtgggtaagaccgccatcgccgaggggctggccttg
cggattgtcaatggcgatgtgcctgagagcctcaaggataaacggctcctcgccctcgac
cttgggtctctcatcgcgggggccaaatatcggggtgaattcgaggagcggctgaaggcc
gtgttgtcggagacgacatcggcggaggggcaaatcattctcttcatcgatgagatgcat
accttggtgggggccgggaagaccgacggcgccatggatgcctccaacctgctgaagccc
gcgctggcccgcggggaattgcactgcatcggcgcgacaaccctcgacgaatatcgtaaa
tatgtcgagaaggatgcggcccttgcgcgtcgcttccaggctgtgttcgtcagtgagcca
acggttgccgatacgatctctatccttcgtgggctgaaagagaaatatgagttgcaccat
ggcgtgcggattgccgacagcgcgattgtttccgcggcgactttatcgaaccggtatatt
accgatcgttttttgcccgataaggcgattgaccttgtcgatgaggcggcctcacggctc
cgtatggccgtggattcaaagcccgaggagctcgatgccctcgatcggcagatcatccag
atgaagatcgagcgggaggcccttctcaaagaggacgataccgcgtcgaaagatcggttg
acggatttggagaagggccttgccgcgcttgaggagcggtcggccgagctgacggccgcc
tggcaggcggaaaaagaggcgctggcctcgaccacgtcagtcaaggaagagctcgacaga
gcccggcaggatctggtggacgccgaacggcggggcgatttggccaaggcctcagagttg
aaatatggccagatcccggccctggagcgtcggcttgaggaggcggagggccgtcaggat
gcggacggggtcaattcaggtcttgtgcaagaggtcgtggatagcgaaacgatcgcgcag
gtcgtttcgaaatggaccggtatccccgtcgacaagatgcttgagggggagcgtgacaaa
ctcctccgtatggaggaggttctccactctcgcgtgatcggacaggaggaggcggtgacc
gccgtatccgccgccgtcaggcgcgcgcgggcgggattgcaggatcctaaccgtcccctt
ggatcgttcctcttcctgggcccgacaggggttggcaagaccgagctgacaaaggccttg
gcggcgtttctgttcgatgacgatcaggccattgcgcggatcgatatgtcggagttcatg
gaaaagcacgcggtcagtcgcctgattggcgcgcctcccggctatgtcggctatgaggag
gggggcgtgttgaccgaggctgtccgtcggcgcccttatcaagtgatcctgttcgatgag
gtggaaaaggcgcacccggatgtattcaatatcctccttcaggtcttggacgatggccgc
ctgacggatggtcaggggcgggtggtcgatttcaagaatacgatcattatcctcacctcc
aatcttggcgcggagtatatgaccggccttgccgaaggacagacggtagagacggtacgg
gagcaggtgatggccgccgtcagaagtgcgttccggccggaattcctcaatcgtctcgat
gagatcattcttttctcgcgtcttgagcgagatcagatgggcggtatcgtcgatatccag
atcgcgcggctacaatcgcttctcgatgatcgaaagatcgttatcgagattgatgacgcg
gctcggcagtggctcgcgcaatcgggatatgatccagccttcggtgcgcgcccgctcaag
cgggtgatccaaaaggccgtgcaagacccgcttgcagagcgtctattggcgggccgcatt
tccgatggagcaacgttgcatctgtctgcggatgatacggggttaattctcgatggggag
catttgacgagtcggaaagccttctccctcgggaccgtgccgacatccgatgccggatcc
cccccaacccacatgctaaattga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (44)   

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