KEGG T01298: PB2503

Parvularcula bermudensis: PB2503_09699

Entry

PB2503_09699 CDS T01298

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

pbr Parvularcula bermudensis

Pathway

pbr00300	Lysine biosynthesis
pbr00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:pbr00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:pbr00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase VWA_2 Peripla_BP_3 Corona_6B_7B

Other DBs

NCBI-GI:

304321491

NCBI-GeneID:

9710158

UniProt:

E0TDS6

Position

1937129..1938571

AA seq 480 aa
MRLSDLIPLDGHLDAEITGLTADSRQVKPGFLFAALPGETTDGRRYIDQAIAAGAAAILA
PTGTTATVPVLADDNPRQALAMLAARFHAGQPKCIVGVTGTNGKTSVARFVAQLWSAFGH
SAGTVGTLGASAPGYDYALRHTTPDPVELHQVISTMAAMGTTHLAMEVSSHGLAQHRADG
VRFSHAGFTNITQDHLDYHPSFEAYFAAKMRLLTALLPETGQAVITTDGAGAEGAIEAAQ
GAGRRVLTVGRRGETLKLLSCVPHQGGLALTVSVEEGPAQSVALSLIGDFQADNALVAAG
LVIASGAEPEAVIEAMAKLSAAPGRMQPAGQKSCEGGMASAFVDYAHTPDAIATALRAIK
PHVPGGRVVVVIGAGGDRDRTKRPLMGRAAAAGADLVIVTDDNPRSEDPAAIRSQVAEGA
PGAQIIGGREAAIRAGAEALKAGDVLLVTGKGHEQTQTIGHVTYPFDDVSTTLAAMGGEG

NT seq 1443 nt +upstreamnt +downstreamnt
atgcgtttgtccgacctcatccccctcgacggccatctggatgcggagattaccggcctg
acggcggattcccgtcaggtgaagccaggctttctctttgcggccctgccgggggagacg
accgacggtcggcggtatatcgatcaggccattgcggccggggcggcggccatcttggcg
ccgacagggacgaccgcgacagtccccgtcctggccgacgacaatcctcgccaggcgctg
gctatgctggccgcccgttttcacgcgggccaaccaaagtgcattgtcggcgtgaccggt
acgaacgggaagacctccgtcgcgcggttcgttgcacagctttggtcggcttttggccat
tctgcgggcacggtcggcaccttgggggctagcgccccgggctatgattacgcgctgcgc
cacacgacccccgatcccgtggagctgcaccaggtgatctccaccatggcggcgatggga
acgacccatctggcgatggaagtgtcctcccacggtcttgcccaacatagggccgacggc
gtccgattttcccatgccggctttacgaatattacccaggaccatctcgattatcatcca
agctttgaggcctatttcgccgccaaaatgcgcctactgacggcccttcttcccgagacg
ggccaagcggtgatcaccaccgacggtgccggcgcagagggggcaatcgaggccgcgcag
ggggcgggcagacgggtgctgaccgttggacggcgcggcgagacgctcaagctcttatcg
tgtgtgccccatcaaggcggattggcattgacagtgtccgtcgaggagggccccgcccag
agtgtcgcgctttcattgatcggtgatttccaggcggacaatgctcttgtggcggcgggg
ttggtcatcgcgtcgggggcggagccggaggcggttatcgaggcgatggccaagctctcc
gccgcgccggggcgtatgcagcccgccgggcaaaaatcatgtgagggggggatggcatcg
gcctttgtcgattatgcccatacccccgatgccattgcgaccgccttgcgggccatcaaa
ccccatgtccccggcgggcgtgtggtggtggtgatcggggccggcggtgatcgcgaccgg
accaaacggcccttaatggggcgggcggcggcggcgggcgccgatctggtcattgtcacc
gacgacaatccgcgttctgaagacccagcggcgatcagatcccaggtcgccgagggcgcc
cccggggcgcagatcatcggcgggcgcgaagcggcgatcagagcgggggccgaggccttg
aaggcgggggacgttctcctggtgaccggcaagggccatgagcagacccagaccatcggc
cacgtgacctatcccttcgatgatgtgtcgacgacccttgcggccatgggaggtgaggga
tga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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