KEGG   Paenibacillus bovis: AR543_03365
Entry
AR543_03365       CDS       T04407                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
pbv  Paenibacillus bovis
Pathway
pbv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AR543_03365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbv03021]
    AR543_03365
   03019 Messenger RNA biogenesis [BR:pbv03019]
    AR543_03365
Transcription machinery [BR:pbv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     AR543_03365
Messenger RNA biogenesis [BR:pbv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     AR543_03365
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA ATPase_2 OB_RNB Spore_III_AA AAA_22 Mor NACHT AAA_25
Other DBs
NCBI-ProteinID: ANF95168
UniProt: A0A172ZC25
Position
782828..784189
AA seq 453 aa
MDLQISDLEEMKLTDLYKLAKQYQIPYYGQLKKKELIFAILRAQAERSGLMFMQGVLEIL
PEGYGFLRPINYLPSAEDIYISASQIRKFDLRTGDLVSGKCRAPKENERYFGLLQVNAVN
GISPEQAAERLHFPALTPLYPQKKLVLETAPNKLSTRIMDVLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPEIELFVLLIDERPEEVTDMQRSVKGEVIASTFDELPENHIKVA
ELVLERALRLVEHKKDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLSERRIFPAIDIRRS
GTRREEDLLAKEELDTIWHIRKNMNDSQDFVEGFLKKLRNSKTNQEFLATFDTREDSKNG
SSGAKKSSPSSSTGSGNTGRRTTRSTTASATTN
NT seq 1362 nt   +upstreamnt  +downstreamnt
atggatttacaaatttccgatttggaagaaatgaagctgaccgacttgtacaaactggcc
aagcagtaccagattccgtattatgggcagctcaaaaaaaaggaattgatctttgcaatt
ctacgtgcgcaggctgaacgcagtggacttatgttcatgcagggcgtacttgaaatactg
cctgaaggatacggattcctgcggccgatcaattatttgccaagtgcagaggatatttat
atttcggcttcacagattcgcaaattcgatctgcgtaccggagacctggtatccggtaaa
tgccgggcacccaaagaaaacgaacgttatttcggacttcttcaggttaatgccgtaaac
ggtatcagtccggaacaagcagcagaacgccttcatttccctgcgctgactcctctctac
ccgcaaaagaagctggttcttgagacagctcccaacaaactctctacacggatcatggat
gtactggctccagtcggactgggacagcgtggtctgatcgtagcacctcccaaagccggt
aaaacactcctgctcaaagaaatcgcgaacagcatctcaacgaacaatccggagattgag
ctttttgtgctgcttattgacgagcgtccggaggaagtgacagatatgcagcgttcggtc
aaaggtgaagttattgcttctacatttgacgaattgcccgagaatcatatcaaagtagcc
gagctggtgctggagcgtgcactgcgtcttgtcgaacacaaaaaagatgtcgttattctg
atggacagtatcactcgtctggcacgtgcctacaatctggtgattccgccatccggtcgt
acactgagcggtggtattgatccggcagctttccatcgtccaaagcgctttttcggttct
gcccgtaatgtagaggaaggcggtagtctgaccatcttggcgacagcgctgatcgacacc
ggctcccgtatggatgatatcatttacgaagaattcaaaggtactggtaatatggagctg
catctggaccgtaaactgtccgagcgccgtattttcccggcgatcgatatccgccgttcg
ggtacacgccgcgaagaagatctgcttgccaaggaagagctggataccatctggcatatc
cgcaaaaatatgaacgatagccaggactttgtggaaggcttcctcaaaaagctgcgcaac
tctaagaccaatcaggagttccttgctacatttgatacccgggaagatagcaaaaacggc
agttccggtgccaagaaatcttcgccttcgtccagtaccggttccgggaacacgggtaga
cgtacgacccgttccactacggcttccgcgacaaccaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

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