KEGG   Syntrophotalea carbinolica: Pcar_0002
Entry
Pcar_0002         CDS       T00285                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
pca  Syntrophotalea carbinolica
Pathway
pca03030  DNA replication
pca03430  Mismatch repair
pca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pcar_0002 (dnaN)
   03430 Mismatch repair
    Pcar_0002 (dnaN)
   03440 Homologous recombination
    Pcar_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pca03032]
    Pcar_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:pca03400]
    Pcar_0002 (dnaN)
Enzymes [BR:pca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pcar_0002 (dnaN)
DNA replication proteins [BR:pca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pcar_0002 (dnaN)
DNA repair and recombination proteins [BR:pca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pcar_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2
Other DBs
NCBI-ProteinID: ABA87265
UniProt: Q3A8M7
Position
1680..2798
AA seq 372 aa
MNFSIEKEVFLKGLARVQGIVEKKNTIPILANVLIEAEDDHIRLTATDLEVGMKASYPAS
VTSAGRITVSAKKLFEIIKELPEKEISFTAKENCWIEIRCGKSLFNVVGLSADEFPYFPQ
IDKEQFFQIPGDILKRLIEKTAFSMSTDESKYNLNGIYLRAMEDEGRQILRFVATDGHRL
ALMQTPLDCSHVEPLAKGVIFPRKGVLELRKIAEEGNGEVLLGFMDNNAVIKKSQTVIVM
RLVDGDFPDYNRVIPLNNDLKANIPREEFLHALRRMAILSSEKSKGVKIDFQENQLTLSS
SNPEFGDAREDFEIEYAEGDLSIGFNARYLIDILANLDSEKVCLSLRDQLSPGLITPLDD
NDYLAVIMPMRL
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaatttttcaattgaaaaagaagtctttctcaaaggcctggcacgagtacagggaatc
gtcgaaaagaaaaacaccattcctatccttgccaacgtactcatcgaggccgaagatgac
cacatacgcctcactgccaccgatctcgaagtcggcatgaaggcttcctaccctgccagc
gtcacatcggcaggtcgtataaccgtatccgccaaaaaactttttgaaatcatcaaggaa
ctaccggaaaaggaaatatcttttaccgccaaggaaaattgttggatagaaatacgctgc
ggtaaatcgcttttcaatgttgttggtctatcagccgatgagtttccctatttcccccag
atcgacaaggaacaatttttccagattccgggcgatatccttaaacgcctgattgaaaaa
accgctttttccatgtcgacggatgagagtaaatacaaccttaatggtatttaccttcgt
gcaatggaagatgagggtcgccagatattgcgatttgtggccacggacggtcaccgtctg
gccttgatgcaaacccctctcgattgttcccatgtggaaccattggccaagggggttatt
ttccctcgcaagggtgtgttggaattacgaaaaatcgccgaagagggaaatggtgaagta
ctgcttggttttatggacaacaatgcggttatcaaaaagtcccaaacggtaatcgttatg
cgtctggtcgatggtgattttcccgactacaacagagttattccactcaataacgatctc
aaggccaacattcctcgcgaagaatttctacatgccttacgccgtatggccatattgtcg
agtgaaaagtcaaaaggtgtcaaaatcgatttccaggaaaatcagctaactttatcttca
tctaatccggaattcggcgatgccagagaagattttgaaatagagtatgccgaaggtgat
ctgtcgataggttttaatgcacgttatcttattgatattcttgcaaatttagactccgaa
aaggtctgtttgtcccttcgggaccaactgtctccgggactgattacgcctctcgatgat
aacgactaccttgcggtcatcatgccaatgaggctatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (66)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (82)   

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