KEGG   Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_028760
Entry
PCC21_028760      CDS       T02320                                 
Name
(GenBank) 5-methylaminomethyl-2-thiouridine methyltransferase
  KO
K15461  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
Organism
pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
Brite
KEGG Orthology (KO) [BR:pcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcc03016]
    PCC21_028760
Enzymes [BR:pcc01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.61  tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
     PCC21_028760
Transfer RNA biogenesis [BR:pcc03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    PCC21_028760
SSDB
Motif
Pfam: DAO Methyltransf_30 NAD_binding_9 Pyr_redox_2 Pyr_redox_3 FAD_binding_2 NAD_binding_8 Amino_oxidase GIDA FAD_oxidored
Other DBs
NCBI-ProteinID: AFR04279
UniProt: A0AA86DHZ3
Position
3241575..3243602
AA seq 675 aa
MTNLPIQHASLSWNAQGTPVSQQFDDVYFSNQDGLAETRYVFLKGNQFPERFATHPRAAC
VIAETGFGTGLNFLTLWQAFADFRQQQPQATLRHLHFISFEKFPLRRHDLAAAHAQWPEL
ATFADELREQWPLPLPGCHRLILAQGTITLDLWFGDVNVLLPELDDTQNHQVDAWFLDGF
APAKNPDMWTDNLFQAMARLCRKEGTFATFTAAGFVRRGLQQAGFQVSKIKGFGQKREML
SGMLPDALPVTSPTPWYARPAASTTDDIAIIGGGIASVLTALALQRRGANVTFYCAEAQP
ATGASGNRQGALYPLLNNRHDAVSRFFSLAFDFAHRSYTALAQQGLEFEHQWCGVSQLAW
DEKSARKIEQILQGDWPEELVVSVDEQQLETQSGLNTGVNGITYPDGGWLCPAELTASAL
KLAQQNGLSVQMSTAVSALEKTNGGWALTLSTGQQVNHAVVVLANGHHITDWPQTSHLPA
YAVRGQVSHVSTNPVLGQLKQVLCYDGYLTPVSPQHQTHCIGASYLRGETHCDYREDEQQ
ENRQRLLNCLPDVDWAKTIDVSDAQARQGVRCALRDHLPLLGAAPDYEQTLAEYEDRLHP
QHRADAVPSAPYWQDLFIIGALGSRGLCSAPLAAEILASQMYGEPLPLDRDTLAALNPNR
FWVRKLLKGKPVAQD
NT seq 2028 nt   +upstreamnt  +downstreamnt
gtgaccaacctccccatccaacacgcgtcgttaagttggaacgctcagggtacacctgta
tcgcaacagtttgatgacgtctatttttcgaatcaggatgggttggcagaaacccgttat
gtgtttttaaagggcaatcagtttcctgagcgtttcgccacgcacccgcgcgcagcctgc
gtgatagcagaaaccggctttggtacgggtctgaattttctgacgctgtggcaggcgttt
gccgactttcgtcaacagcagccacaggcgacattgcgccacctgcattttattagcttc
gagaaattccccctgcgtcggcatgatttggctgcggcacacgcccagtggccggagctg
gccacctttgcggatgaactgcgagagcaatggccgctaccgctgccgggctgccatcgt
ctgattctggcgcaaggcactattacgctcgatctgtggttcggtgacgttaacgtctta
ctgcctgagctggatgatactcagaatcatcaggtcgacgcctggtttctggacggcttc
gcgcctgccaaaaacccagatatgtggacggataatctgtttcaggcaatggctcgtctg
tgccgaaaagaagggacgttcgccacctttacggccgcaggctttgtgcgtcgcggtctg
caacaggcggggtttcaggtcagtaaaatcaaaggatttggccagaaacgggaaatgttg
agcggcatgcttcctgatgcacttcccgtcacgtcaccaacaccgtggtatgcacgccct
gccgccagcacgactgacgatattgcgattatcggcggcggcatcgccagcgtgcttact
gcccttgcgctgcaacggcgcggtgcaaacgtcacgttctactgcgcggaagcacagcct
gccacgggcgcatccggcaatcgtcagggggcgctgtatcctctgttgaataaccggcac
gatgcggtatcccgctttttctccctcgcctttgactttgcccaccgcagctataccgcg
ctggcgcagcagggtctggagtttgagcatcagtggtgcggcgtcagccagcttgcctgg
gatgaaaaaagtgcgcgtaagatcgaacagattctgcaaggcgactggccggaagagctg
gtcgttagcgtggatgaacagcaactggaaacgcaaagcggcctgaataccggcgtaaat
ggcatcacttatcctgacggcggctggctgtgtccagcggagctgacggcttctgcgctg
aaactggcacagcaaaacggtctgtcggtacagatgagcaccgccgtttccgcactggag
aaaacgaacggcggctgggcgctcaccctgagcaccggccagcaggtaaatcatgccgtc
gtggtgctggcaaatggtcatcacattaccgactggccacaaacatcccatttacccgct
tacgccgtgcgcgggcaggtcagccatgtttcgaccaacccggtgctaggtcagctcaaa
caggttctctgctacgacggctatctgacgccagtgagtccgcagcatcagacgcactgc
atcggggcaagctatttacggggggaaacacactgtgattatcgggaagacgagcagcaa
gaaaaccgccaacggctactgaattgtttgcctgacgtagactgggcgaaaacgatcgat
gtcagcgatgcgcaggcacgtcaaggcgtccgctgtgcgctacgcgatcatctgccgcta
ttaggcgcggcaccggactatgaacaaacgctggccgagtatgaagatcggttgcaccct
caacaccgcgccgacgcggtgccaagcgcaccctattggcaggatctgtttattatcggt
gcgttgggctcacgcggcctctgctccgctccactcgcggcagaaattctggcctcacag
atgtatggtgaaccactaccgctggaccgcgatacgctcgccgcgctcaacccaaatcgt
ttctgggtaagaaaactgctgaaaggcaaacctgtagctcaggattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (30)   

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