KEGG   Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_032250
Entry
PCC21_032250      CDS       T02320                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
pcc  Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PCC21_032250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcc02044]
    PCC21_032250
Secretion system [BR:pcc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PCC21_032250
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 Phage_Mu_Gp45 DUF2345
Other DBs
NCBI-ProteinID: AFR04628
UniProt: A0AA85ZKI6
Position
complement(3645985..3648021)
AA seq 678 aa
MANSTGLQFTVKVGALEAGTFAVVDFRLDEGLNRPFSLSLSLASALPDVDFGVVLDQPCE
LMIWYEGELKRRVSGIISGFTQGDTGFRRTRYQIEVRPALWRLGLRTNARIFQAQKPEAI
IGALLEEAGITDYAFALRNEHAVREYCVQYRESDLAFITRLAAEEGIYFFHEYEEGKHRV
VFADDAGALTKGPELFFNLATQGLSEGEYVRRFHYAERVSTAEVELKDYSFKTPAYGLSH
KKMSGELAHQRESYQHYDYPGRYKQDPSGKAFSGYRLDALRSGAVTSEGESNCAGLMPGN
TFTLTEHPNATLNAVWQTVSVTHVGQQPQALEEESGGEPTTMSNSFAVVKGTTTWRAAMP
YKPMVDGPQIATVVGPTGEEIYCDPYGRVKLQFPWDRYGASNDQSSCWVRVSQGWAGGQY
GMIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPTPYVLPAHKTRTTLRTDTHKGSGF
NELRFEDEATREQIYYHAQKDMDGVINNIHRQSVGRDQHLSVDQDQFQRVTRHRHRTIGK
DDFENIGQDHHQEIGRSFIQKIGASFKRFIGGGEITRIEGSRQTTMSGSEETLIGAHQRV
LVNTDSYLKAADIVLEAGQALTIKGPGGFIKIDSAGVTISGTIVKINDGGAAGVGTAPVS
ITPEDPTKPTLPDAPDRR
NT seq 2037 nt   +upstreamnt  +downstreamnt
gtggcaaacagtacaggattacagttcaccgtaaaggtcggtgccctggaagcaggcact
ttcgcggtggtggatttcaggctggatgaagggctgaaccggcctttcagcctgtcgctg
agtctggcgagtgcgttgccggatgtcgatttcggcgtggtgctggaccagccgtgcgag
ctgatgatttggtatgaaggcgaactgaaacgtcgggtcagcggaattatcagcggcttt
acgcagggtgacaccggattccggcgcacgcgctatcagatagaggtccgtcctgccctg
tggcgactgggattacgcaccaacgcccgcatctttcaggcgcaaaagccggaagcgatt
atcggggcgctgctggaagaagccggtatcaccgactacgcctttgcgctgcgtaacgag
catgcggtacgggaatactgcgtgcagtatcgggaaagcgatttagcctttatcacccgg
ctggccgccgaggagggcatatatttcttccacgaatacgaagagggtaaacaccgggtg
gtgtttgctgacgatgcgggcgcactgaccaaaggccccgagctgttcttcaatctggcg
acgcaggggctgagtgagggcgaatatgtccggcgcttccactacgcggagcgggtgagt
acggccgaagtcgagctgaaagactacagcttcaagacaccggcttacgggctgtcgcac
aagaaaatgagtggcgagctggcgcaccagcgcgaaagctaccagcattacgactacccg
gggcgctataagcaagacccgagtggtaaggcgttcagcggctaccggctggatgcgctg
cgctcaggggcggtgacgagcgaaggggaatccaactgtgcggggctgatgccgggtaac
accttcacgctgacggagcacccgaatgcgacgctgaatgcggtgtggcagacggtgagc
gtgacgcacgtcgggcaacagccgcaggcgctggaagaggaaagcggcggcgaaccgacg
accatgagcaacagttttgcggtggtgaaagggacaacgacgtggcgtgctgccatgcct
tacaaaccgatggtggacgggccacaaatcgccaccgtcgtcggcccaacgggagaagaa
atctactgcgacccgtatggtcgggtaaaactacaattcccgtgggatcgctacggtgcg
agtaatgaccagagttcctgctgggtgcgcgtcagtcagggctgggcgggtggccagtac
ggcatgattgccatcccgcgtatcggtcatgaagtgatcgtcagcttccttgaaggcgat
ccggaccagccgattgtcaccgggcgtactttccacgccaccaacccgacgccgtacgtt
ttaccggcacataaaacgcgtaccacgcttcgtaccgatacgcataaaggtagtggcttc
aacgaactgcgttttgaggatgaggcgacgcgtgaacagatttactatcacgctcagaaa
gatatggatggtgttatcaacaacatccaccggcagagcgtagggcgcgatcagcacctc
agcgtggatcaggatcagttccaacgggtcacgcgtcaccgccaccgaacgataggcaag
gatgattttgaaaacatcggtcaggatcatcaccaggaaattggccggagttttattcag
aaaattggtgcgtcgttcaaacgtttcatcggtgggggggagattacccgtatcgaaggg
agccgtcagaccacgatgtctggttctgaagagacgctgatcggcgcgcaccagcgcgtt
ctggtgaatacggacagctacctgaaagctgcggatatcgtgctggaagcggggcaggca
ctgaccatcaaagggcctggcggctttatcaagattgatagcgcgggtgtcacaatttcc
gggacgattgtgaaaatcaacgatggcggtgcggctggcgtagggactgcgccagtatcc
attacgccagaagatccgacgaagcctacgctgcccgatgcgccagacagacgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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