KEGG   Pediococcus claussenii: PECL_1360
Entry
PECL_1360         CDS       T01713                                 
Name
(GenBank) DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pce  Pediococcus claussenii
Pathway
pce03420  Nucleotide excision repair
pce03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PECL_1360
   03430 Mismatch repair
    PECL_1360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pce03400]
    PECL_1360
Enzymes [BR:pce01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PECL_1360
DNA repair and recombination proteins [BR:pce03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PECL_1360
   MMR (mismatch excision repair)
    Other MMR factors
     PECL_1360
SSDB
Motif
Pfam: UvrD_C UvrD-helicase AAA_19 Viral_helicase1 UvrD_C_2 SLFN-g3_helicase AAA_30 DEAD AAA_14 AAA_16 NACHT DUF1959 AAA_12 YflT SesA DUF4845
Other DBs
NCBI-ProteinID: AEV95586
UniProt: G8PEH7
Position
complement(1318004..1320313)
AA seq 769 aa
MVVVDNPIFKNEKAHLNGVVVKIQTAIQKAEKDAKTAEKDTNAIHKNFSNDVRINTANYS
ELLETAASVRQQQQLLAERENSWQHATKQLDVLTKLEKKPYFARIDIHENGEKNDETIYI
GMSSFSDSPDHFLVYDWRAPISSVYYDGKMGNVEYATPDGTQQVDLKSKRQFVIEDSKLI
SVYDTDETIGDQMLLDALGNQSDIKMKSIVSTIQREQNKIIRNTSADLLFVQGAAGSGKT
AAILQRVAFLLYRYRGKLTAGQVLMFSPNQLFNDYVDQVLPELGEQNMVQMTYFQFSRRR
LPNLDIESLQERFEREVTPAQKNIQDFEGSLQFFNAVTSYATHLNQNGMRFRNIMYQGKP
IFKKEKIRDIYYSFSSTYNLGNRLDGTREALVKMLNQRVGSELRSNWVEDAVQELSQEEV
RTILQKADHEFKDNDEEFKFLARQLVMKELKPVRDAIVRNRFFSINAQYVQMLRAIPKIV
SLENIGITQEEWDSHVESVVNDIRNHHISLLDTSAYLYLYDQMVGKRGDRSMRYVFIDEI
QDYNAFQLAYIRYNFPRAKFTLLGDLNQSIFTGETTHSLLNELSTMFNPEKTEVIQLTQS
YRSTQQITDFTKELLTEGESIDSFSRNGELPKVVLSSTQQQMVQSVVDQLQRDEQDNETT
AIIGRSTAECEEIADLLKAAGQKVTLIKSENQRLVEGTIIVPSFLAKGLEFDSVVVWNAS
EKEYGENDQQLLYTICSRAMHRLLVVTDGQISPLIAKVPQNLYEFFQNK
NT seq 2310 nt   +upstreamnt  +downstreamnt
gtggttgttgtggataatccaatttttaaaaacgaaaaagcacatttaaacggtgtggta
gtcaagatacagactgctattcaaaaggctgaaaaagatgccaagacggctgaaaaagat
acgaatgccatccataagaattttagcaatgatgttcgaattaatactgccaactattcg
gaattgctggaaacggctgcatcagttcgtcagcagcaacaactacttgccgagcgcgaa
aatagctggcaacatgctactaaacaattggatgtactgactaaacttgagaagaaaccc
tactttgcacgaattgatatccatgaaaatggcgaaaagaatgacgaaacaatttacatt
ggcatgagttcgttttcagacagtccggatcatttcttggtatatgattggcgtgcgcca
atttcaagtgtttattatgacgggaaaatgggaaacgttgaatatgcgactcctgatggt
actcaacaggtcgatctaaaaagtaagcgacagtttgtgattgaagatagcaaactgatc
agcgtgtatgatacggatgagacaattggggatcagatgcttttggatgccctgggaaac
cagtccgacataaaaatgaaaagtattgtttccacaattcaaagggaacaaaataagatt
attcgtaatacttcggcggatttactatttgttcaaggtgcggccggatcgggtaagacc
gccgcaattttacagcgcgtggcctttctactttaccgttatcgtggcaaattgacagcc
ggacaggttttaatgttttcaccaaaccaattgtttaatgactatgtggatcaagttttg
cccgaactaggagaacaaaatatggttcagatgacctattttcaattttcacgtcggcgt
cttcctaatttagatattgaaagcttacaagaacgctttgaacgagaggtaactccggct
caaaaaaatattcaagatttcgaaggtagcctgcaatttttcaatgcagttacaagttat
gcaacgcacctgaatcagaatggaatgcgttttagaaatattatgtatcagggtaaacca
atttttaagaaggaaaagattcgtgatatttactattcatttagtagcacctataatttg
gggaatcgattagatggtactcgtgaggcgttggttaaaatgttaaatcaacgtgttggt
tccgagttacgttctaactgggttgaagatgctgttcaggaacttagccaagaggaggtt
cgtaccatattacaaaaagctgatcacgagtttaaggataacgatgaagagtttaaattc
ttagctcgtcagttagtaatgaaagaattaaaacctgttcgagatgctatcgttagaaac
cgcttctttagtatcaatgcacagtatgttcagatgctacgagcaatacccaagattgta
agccttgaaaatattgggattacacaggaagaatgggattcacatgttgaatcagtcgtt
aatgatatccggaatcatcatatctcgcttctagatacatctgcatatttgtacttgtac
gatcaaatggttggtaaacgtggagatcgctcaatgcgttacgtctttattgacgaaatc
caagactataatgctttccaacttgcgtatatccggtataactttccaagagctaaattt
actttactaggggatttgaaccagtcaatttttactggtgaaactactcatagtctttta
aatgaactttcaacgatgtttaatcctgaaaaaaccgaagtgatccaattaacacaatcg
taccgctcaacccagcagattacagatttcactaaggaattgttgactgaaggagagtcg
attgattcgtttagccgcaatggtgaattgccaaaagttgtattaagctcgacgcaacaa
cagatggttcaatcggttgtggaccaattgcaacgcgatgagcaggataacgaaacaact
gccattattggtaggagtacagcagagtgtgaagaaattgctgatttattaaaggcagcc
ggtcaaaaggttacattaattaagtctgaaaaccagcgtttggttgagggaaccattatc
gtaccgtcgttcttggctaaggggcttgaatttgattctgtagtagtttggaatgcatcc
gagaaagaatatggcgagaatgatcagcaactgctttatacgatttgttcgcgagcaatg
catcggttattggttgttaccgacggacaaattagtccattaattgctaaagtaccccaa
aatttatatgaattttttcaaaataagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (27)   

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