KEGG   Pseudomonas corrugata: AXG94_06415
Entry
AXG94_06415       CDS       T04842                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
pcg  Pseudomonas corrugata
Pathway
pcg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AXG94_06415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcg03400]
    AXG94_06415
DNA repair and recombination proteins [BR:pcg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AXG94_06415
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AXG94_06415
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_22 AAA_30 HAMP
Other DBs
NCBI-ProteinID: AOE61415
UniProt: A0A3M3EM78
Position
complement(1603047..1605062)
AA seq 671 aa
MSEFQLVTRFKPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIDGIKAELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEINKRVAIDERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVVVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLRDE
IGKLRERLLTV
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgtctgaattccagctagtcacccgattcaagcccgctggcgaccagccggaagccatc
cgcctgatggtcgagggcatcgaggcggggctggcccaccagacgttgctcggtgtgacc
ggttcgggcaagaccttcagcatcgccaacgtgatcgcccaggtgcagcgtccgaccctg
gtgctggcaccgaacaagaccctggcggctcagctgtatggcgagttcaaggcgttcttc
ccgaacaacgccgtggagtacttcgtctcttactacgactactaccagccggaagcctac
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcggctgtcggcgaccaaggcgttgctcgagcgcaaggatgcgatcatcgtcaccacg
gtgtcgtgcatctacggcttgggcagcccggaaacgtacctgaagatggtgctgcacgtg
gatcgcggcgacaaactcgaccagcgtgccttgctgcgccgcctcgcggacctgcaatac
acccgcaacgacatggatttcgcccgggcaacgttccgggtgcgcggggatgtgatcgac
atctaccccgcggaatccgacctggaggcgatccgcatcgaactgttcgatgacgaggtg
gagagcatttcggcgttcgatccgctgaccggcgaggtgatccgcaagctgccacgcttc
accttctaccccaagagccactatgtcacgccgcgggaaaccctgctggacgccattgac
gggatcaaggccgagctccaggagcgcctggagtacctgcgctcgaacaacaagctggtg
gaagcccagcgcctggagcagcggacccggttcgacctggaaatgatccttgaactgggt
tattgcaacggtatcgaaaactactcgcgctacctgtcgggccgcccggcgggtgcgccg
ccccccaccttgtatgactacctgccggccgacgccttgctggtgatcgacgaatcccat
gtcagcgtgccccaggtgggcgcgatgtacaaaggcgaccggtcccgcaaggagaccctg
gtggaatacggattccgcctgccttcggcgctggacaaccggccgatgcgtttcgatgaa
tgggaaggcgtgagcccgcagactatttttgtctcggccacccccggcaactacgaagcc
gagcatgccggtcgcgtggtcgagcaagtggtgcggccgaccggcctggtggacccgcaa
gtcgaagtgcgcccggcgctgacccaggtcgacgacctgctttcggaaatcaacaagcgc
gtggccatcgacgagcgggtcctggtgaccaccctgaccaagcgcatggccgaggacctc
accgattacctggccgatcatggcgtgcgggtgcgatacctgcattcggatatcgacacg
gtggagcgggtcgagatcatccgcgacctgcgcctgggcaccttcgacgtggtggtgggc
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgctggtggcgatcctcgac
gccgacaaggaaggcttcctgcgctccgagcgctcgctgatccagaccatcggccgggcg
gcgcgtaacctcaatggccgggcgattctgtatgccgaccgcatcactggctccatggaa
cgggccatcggtgagactgagcgccgtcgtgacaagcagatcgccttcaacctggccaat
ggcatcacgcccaaaggggtgttcaaggacgttgccgatatcatggaaggtgccaccgtg
cccggttcgcgcagcaagaagcgcaagggcatggccaaggccgccgaagagagcgcccgc
tacgaagcggaactgcgctcgccgagcgaaatcaccaagcgtatccgtcagttggaagag
aaaatgtaccaactggcccgggacctggaattcgaagcggcggcgcaattgcgggacgag
attggcaagttgcgcgagcggttgctcactgtctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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