KEGG   Pedobacter cryoconitis: AY601_4638
Entry
AY601_4638        CDS       T04341                                 
Name
(GenBank) Methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00270  Cysteine and methionine metabolism
pcm00450  Selenocompound metabolism
pcm00670  One carbon pool by folate
pcm01100  Metabolic pathways
pcm01110  Biosynthesis of secondary metabolites
pcm01230  Biosynthesis of amino acids
pcm04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    AY601_4638
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    AY601_4638
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    AY601_4638
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    AY601_4638
Enzymes [BR:pcm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     AY601_4638
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: AMQ01474
UniProt: A0A127VJH1
Position
complement(5399208..5402867)
AA seq 1219 aa
MSIREELKKRILIIDGAMGTMIQRYILTEEDFRGARFANHPCDVKGNNDLLNITRPDIIK
AIHTEYLKAGTDIIETNTFSTQRISLADYKMEELDYEMSFEGAKIAKEAVNEFMAANPDR
VCFVAGAVGPTNRTLSISPDVNDPGYRALTFDELVDAYYKQIRGLVDGGSDLLLIETIFD
TLNAKAAIFAIKKYEEIIGRKIEIMISGTITDASGRTLSGQTVEAFLNSILHANPLSIGF
NCALGAKDMRPHIEELSAKAPCYVSAYPNAGLPNEFGAYDEMPNETASLVSDFIQHGFVN
IVGGCCGTTPEHIAAIAAKAKNITPRQIPEIPRYLRLSGLEPVTITPDSMFVNIGERTNI
TGSPKFSKLILSGDYEAALTVARQQVEGGAQVIDVNMDEGMLDSEAAMTKFLNLIASEPD
ISKLPIMVDSSKWSVIENGLKCLQGKGIVNSISLKEGEDKFRESARKIMNYGAAIVVMAF
DENGQADNFERRKEICKRSYDILVDEIGFPAEDIIFDPNILTVATGLEEHNNYAVDFINA
ARWIKENLPYAKVSGGVSNISFSFRGNNTVREAMHSAFLFHAIKAGLDMGIVNSGMLEVY
EAIPAELLERVEDVLLNRREDATERLVDFAETVKSKGKELVKDEEWRKAPVESRLSHSLV
KGIIEYLDADVEEARQQYARPIHVIEGPLMDGMNIVGDLFGAGKMFLPQVVKSARVMKKA
VAYLLPFIEQEKLDNPDGDQSSSAGRILLATVKGDVHDIGKNIVGVVLACNNFEIVDLGV
MVPAQEIIRKAKEINADIIGLSGLITPSLDEMVHFAKEMEREGFTVPLLIGGATTSRIHA
AVKIAPNYSGPAIHVLDASRSVTVCSTLMNAETRGGYIDNIRQEYDKAREAHLNKRNDKR
FKSIEEARTDKFTIDPALVAPAPKFLGTKTFEDYPLEILVPYIDWTPFFHTWELRGSYPK
IFNDKSVGVEAKKLYDDARVLLQKIVDEKLLTAKAVIGFWPAHAKGDDIVLDVDGNPVTI
HTLRQQAEKVAGEPYYALSDFVATKEDGVQDYFGGFAVTTGIGCDEMVAEFEANYDDYNS
IMAKALADRLAEAFAEHLHELVRKDYWGYAKDEQLTNEDLIKEEYAGIRPAPGYPACPDH
TEKETLFDLLGAEQKIGLRLTESFAMYPTAAVSGFYFSHPQSRYFGLGKITKDQVEEYAV
RKNMSLEDTERWLSPNLAY
NT seq 3660 nt   +upstreamnt  +downstreamnt
atgagcataagagaagagcttaaaaaacgaatactaatcatcgatggcgcaatgggcacc
atgatccaacgctatatcctgactgaagaagacttcagaggagcgcgctttgcgaatcat
ccatgcgacgtcaaaggaaataatgacctgctgaatattacccgtcctgatatcattaaa
gctatccataccgaatatcttaaagcaggaacagatatcattgaaaccaatacttttagt
acgcaaagaatctctcttgcggattataagatggaagaactcgactatgaaatgagtttt
gaaggcgctaaaatagccaaagaagcagtcaatgaattcatggctgcaaatccagaccgc
gtttgctttgttgcaggtgctgtaggcccgactaaccgtaccttgtccatctcaccagat
gtaaatgacccgggatacagagccttaacctttgatgaactggttgacgcttactacaaa
caaatcagaggattggttgatggcggatcagacctgttattaattgagaccatttttgat
actttaaatgcgaaggcagcaatctttgctatcaaaaaatacgaagaaattatcgggcga
aaaattgaaattatgatttccggaaccattacagacgcatcaggcagaacactatccggt
caaactgtagaagctttcctgaattcaatccttcatgccaacccattgagcatcggcttt
aactgtgcactgggtgcaaaagacatgaggccccatattgaagagctgtctgccaaagca
ccctgttacgtatctgcataccctaatgcaggtttaccaaacgaatttggagcttatgat
gaaatgcccaacgaaacagcttcattggtttcagactttattcagcatggttttgtcaat
attgtgggtggttgttgtggcactacgccagagcatattgcagccattgccgcaaaagcc
aaaaacattaccccaagacaaataccagaaataccacgttaccttcgcctgagcggactg
gaacctgtaaccattacgcccgacagcatgtttgtcaacattggtgaaagaaccaatatc
acaggctccccaaaattctccaagctaattttaagtggtgactacgaagccgcactcacc
gttgccaggcaacaagtagaaggcggggcgcaagtcattgacgtgaacatggacgaaggg
atgctggactctgaagccgcaatgaccaaattcctgaacctgattgcttcagaacctgat
atttcaaaactgccgatcatggtcgattcttctaaatggagtgtcattgaaaacggttta
aaatgtttacagggaaaagggattgtcaattccatttcactcaaagaaggagaagataaa
ttccgtgaaagtgcccgtaagattatgaattacggtgcagcgatagtggtgatggccttt
gatgaaaacggacaagcagataactttgaacgcagaaaagaaatctgtaaacgttcttac
gacatcctggtagatgaaattggcttcccggcagaagatattattttcgacccgaatatc
ttaaccgtagccacgggtttagaagaacacaataactatgcagttgattttatcaacgca
gcacgctggattaaagaaaacctgccctatgcgaaagtaagcggtggtgtatccaatata
tctttctctttcagaggaaacaataccgtacgtgaggccatgcactctgcctttttattc
cacgctattaaagccggactggatatgggaattgtgaattccgggatgctggaagtttat
gaagctatccctgccgaattactggaacgcgtagaagacgttttgttaaaccgccgggaa
gatgctacagaacgcctggtagactttgcagaaacggtaaaatctaaaggaaaagaactc
gttaaagacgaagaatggagaaaagcacccgtagaatcccgtctttcccactctttggtt
aaaggtattattgaatacctggatgccgatgtagaagaagcaaggcaacaatacgcccgc
cctattcacgtgattgaaggcccgttaatggacggaatgaatatcgtaggtgacttattc
ggtgccggaaaaatgtttctcccacaggtcgtaaaatcggccagggtaatgaagaaagcc
gtagcttacctgcttccctttattgagcaggagaaactggacaaccccgatggtgaccaa
agctcttcggcaggcagaatcttattggccacagtaaaaggcgatgttcatgatattggt
aaaaacattgtaggcgtagtattggcctgtaacaactttgaaattgtcgatttaggcgtg
atggtccctgcacaggaaattatcagaaaagccaaagaaatcaacgcagatattattggt
ttaagcgggctgatcacaccttcactggatgaaatggttcactttgccaaagaaatggaa
cgtgaaggctttaccgtacccctgttgattggtggtgcaaccacttccagaatacatgcc
gctgtaaaaatagcgccaaattattctggccctgccattcacgtactggatgcctccaga
agtgtgaccgtatgcagtaccctgatgaacgcagaaacccgcggtggttatattgataat
atcaggcaggaatatgataaggcccgggaagcacatttgaataaacgtaatgataaacgt
ttcaaatctattgaagaagcaaggaccgataaatttacgattgaccctgcccttgtagct
cctgcacctaaattcctcgggactaaaacatttgaagattacccgctggaaatccttgtg
ccttatatcgactggactccttttttccacacctgggaattaagaggcagttatccaaaa
atattcaacgacaaatcagttggcgtagaggcaaaaaaactatacgatgatgcccgtgta
ctgttacaaaagatcgttgacgaaaaattactgaccgctaaagcagtgatcggtttctgg
ccggcacatgccaaaggcgatgatatcgtattagatgtggatggcaaccccgtgactatc
cataccctgcgtcagcaagcggagaaagttgccggagaaccttattacgccttatcagat
ttcgtggcaactaaagaagatggtgttcaggactattttggcggtttcgcagtgactaca
ggtattggctgtgacgaaatggtggctgaatttgaagcgaactatgacgattacaacagt
attatggcaaaagcactggcggacaggctggctgaagcatttgctgaacacttgcatgaa
ttagtccgtaaagattactggggctacgcaaaagacgaacaattgactaacgaagatctg
atcaaagaagaatacgcaggtatccgtccggcaccaggttaccctgcatgcccggaccac
accgaaaaagaaacactgtttgacttattgggtgcagaacaaaaaatcgggctgcgctta
acagaaagcttcgcgatgtacccaaccgcagcagtcagcggattttatttctcacaccct
caatccagatacttcggcctcgggaaaataaccaaagatcaggtagaagaatacgcagtc
agaaaaaacatgtcacttgaagataccgaaagatggcttagtccgaatttagcctattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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