KEGG   Pedobacter cryoconitis: AY601_4956
Entry
AY601_4956        CDS       T04341                                 
Name
(GenBank) Succinate dehydrogenase
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
pcm  Pedobacter cryoconitis
Pathway
pcm00020  Citrate cycle (TCA cycle)
pcm00190  Oxidative phosphorylation
pcm00650  Butanoate metabolism
pcm01100  Metabolic pathways
pcm01110  Biosynthesis of secondary metabolites
pcm01120  Microbial metabolism in diverse environments
pcm01200  Carbon metabolism
Module
pcm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pcm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:pcm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AY601_4956
   00650 Butanoate metabolism
    AY601_4956
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    AY601_4956
Enzymes [BR:pcm01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     AY601_4956
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Pyr_redox_2 GIDA NAD_binding_8 HI0933_like FAD_binding_3 3HCDH_N
Other DBs
NCBI-ProteinID: AMQ01774
UniProt: A0A127VKC4
Position
5799207..5801123
AA seq 638 aa
MELDAKIPAGPLETKWSQYKAQAKLVNPANRKKLPVIVVGTGLAGASAAASLAEQGYPVT
SFCFQDSARRAHSVAAQGGVNAAKNYQNDGDSVYRMFYDTLKGGDFRAREANVYRLAECS
LNLIDQAVAQGVPFAREYGGYLSNRSFGGVQVSRTFYARGQTGQQLLLGAYQALMRQVSL
GKVNLYSRHEMLDLVVIEGKAKGIIARNLDTGLIERFAAEAVVIATGGFGKIYYLSTLAM
GCNGSAIWRAHKRGALMACPSWTQIHPTSLPQSGDYQSKLTLMSESLRNDGRIWVPQLPD
EQRAANDIPEQERDYYLERRYPSFGNLAPRDISSRAAKERIDAGFGVGAQRNAVYLDFSK
AIKEQGKEKIKEKYGNLFSMYKKITADDAYAAPMKISPAAHFSMGGLWVDYELMTTIPGL
FAIGEANFADHGANRLGANSLLQACVDGYFILPYTLANYLSGELKKEKITTDHPEFDRTE
KEVVTQLTGLCELKGTKTADYFHKKLGKLLYDKCGLSRSAEGLTAAIEGIKILRTAFYKD
LIVPGTAGEINSELEKAGRVADYLEIAELMCHDALSREESCGAHFREEYQTADGEALRDD
ENYCYVSAWEWRGKNSLPVLHPEHLKFEFIKLSVRSYS
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggaattagatgctaaaataccagctggcccgttagagactaaatggagtcagtacaaa
gcgcaggctaaactggtcaatcctgcaaaccggaaaaaattacctgttattgtggttgga
accgggcttgctggcgcatctgctgctgcttctttagctgaacagggttatccggtcact
tctttctgtttccaggattctgccagaagagcacattcagtagctgctcagggcggcgtg
aatgcagccaagaactatcagaatgatggagactctgtttacaggatgttttatgatacg
ctgaaaggcggggatttccgggcacgtgaagctaatgtataccgtttagcggaatgttct
ttaaatctgatcgatcaggcagtagcacaaggtgtaccttttgcgagggaatatggcgga
tacctgagtaaccgttcttttggcggagtgcaggtgagccgtactttttatgcgcgggga
caaaccggacagcaattgctgctgggtgcttatcaggcattgatgcggcaggtttctctt
gggaaagttaatttatacagcaggcatgaaatgctggatctggtggtcatagaagggaaa
gctaaaggaattattgcaagaaatctggacactggattaatagaacgttttgctgccgaa
gctgtagtgatagctacaggcgggtttggtaagatttattatttatccacgctggctatg
ggctgtaatggctcggccatttggcgggcacataaaagaggagcgctgatggcttgtcca
agctggacacaaattcacccgacgagtttacctcaatcgggagattatcagtcgaaatta
acgctgatgtcagaatcattgcggaatgacggaagaatctgggttcctcaattaccagat
gaacaaagggctgcaaatgatattcctgaacaggaaagagattattatctggaaagacgt
tatccttcgtttggtaatctggcaccaagagacatttcttccagagcagctaaagaaaga
attgatgctggtttcggggtcggcgcacagcggaatgcagtgtatctcgatttttcaaaa
gcaatcaaagagcagggcaaggagaagatcaaagagaagtatggaaacctgttttctatg
tataaaaagataactgccgatgatgcgtatgctgcaccaatgaagatttctcctgctgca
catttttcaatgggtggtttatgggtggactatgaactgatgactactattccaggttta
tttgccattggagaggctaattttgcagaccatggtgcaaacaggctaggggcaaattct
ttgttgcaagcctgtgtagatggttatttcatccttccatataccctggctaattattta
tcaggggagttgaagaaagaaaagataacgactgatcatcctgaatttgaccggactgaa
aaagaagttgtcacgcagctgaccggactttgtgagctcaaaggcacaaaaacagcagat
tacttccataaaaaattagggaaattattatatgataaatgtggtttgtcacgctctgct
gaagggttgacagcagctattgaagggattaaaatattaagaacagcgttttataaagac
ctgattgttcctggaacagctggtgaaattaacagcgaactggaaaaagcaggcagggtg
gctgattacctggagatcgcagagctgatgtgtcatgatgcattaagcagagaagaatca
tgcggtgcacatttcagggaagaatatcaaactgcggatggcgaagcgttaagggacgat
gaaaattattgttacgtgtctgcatgggaatggaggggaaaaaatagtcttcctgtatta
caccctgagcacttaaaattcgaatttattaaattatcagtaagaagttatagttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (35)   

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