KEGG   Phanerochaete carnosa: PHACADRAFT_110354
Entry
PHACADRAFT_110354 CDS       T03128                                 
Name
(RefSeq) hypothetical protein
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
pco  Phanerochaete carnosa
Brite
KEGG Orthology (KO) [BR:pco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pco03009]
    PHACADRAFT_110354
Enzymes [BR:pco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PHACADRAFT_110354
Ribosome biogenesis [BR:pco03009]
 Eukaryotic type
  90S particles
   Helicases
    PHACADRAFT_110354
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 SbcC_Walker_B
Other DBs
NCBI-GeneID: 18907619
NCBI-ProteinID: XP_007390160
JGI: Phaca1_110354
UniProt: K5W9S8
Position
Unknown
AA seq 576 aa
MEAFHLLSRGGALFDKKRFKKDVQLFDKSKNQDKGKGIAKPATDGELPRELDFFKYAQGG
STKRKTESDPQTTIKKARLEEDMEADEGTEDIKAAEDGEPSSSMSRQRVTAKGNSVPAAV
ESFEELMERYNIPGKLLQNLEASGYGQPTGIQAHGVPILLEHRDLAAISPTGTGKTLSYL
LPVFASLGAPSSSSDSEHGQGVRALVLAPTRELAHQIHNECLKLAQGRKWRIVLFSKATA
ATLADKNAQDKVDIVISTPLRMVAALQSGNLKLSNVRHLVLDEADRMLDPEFLEQIREII
AACSYPRVQKAVFSATLPANAERIAMDMMTNPIRVVVGLKDTPLPLIAQSLTYVHDDSSK
LPTLLQYLAQPYNPPVLVFVSTQPRASSLAEELVLNDIQNVDCLHAGMSKKEREDAVSRM
RKGESWVMVTTEVMARGMDFKGVREVINYDFPQSVQSYVHRIGRTGRAGREGKAVTYFTD
EDAPFLKTIANVILQSGSTVPEWILKLPKPSKMKRREMGKVKRADAVNSARRIGRQEAIK
KRCMVKASKRRKERVIQIAHPQRGDGKPSEAAENAE
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggaagcgtttcatctactctcgcgtggaggtgccctattcgacaagaagcgattcaag
aaggatgtgcaactgttcgacaaatccaaaaatcaggacaagggcaagggcatagcaaag
cccgccacggacggcgagctccccagggagctagacttcttcaaatacgctcagggcgga
tcgacgaagcgaaagacagagtcagacccgcagacaacgatcaagaaagcacgcttggaa
gaggacatggaagctgacgagggcaccgaggatatcaaggcggcagaggacggcgaaccg
tcgagctctatgtcgcgacaacgggtgactgcgaaggggaacagcgtgcctgcagcggtg
gaaagctttgaggaactgatggagagatataacatcccgggaaagctgctgcagaatttg
gaggcaagcggatacggacagcccacgggtattcaggcgcatggcgtgcctatcctcctg
gagcaccgagaccttgctgcaatatcgcccacagggacgggcaaaacgctttcgtacctc
cttcccgtctttgcatcccttggtgcacccagctctagctcagactccgagcatggacag
ggcgtccgcgctctggttcttgcgccaactcgtgaattggcccaccaaatacataacgaa
tgccttaaattagctcaaggacgcaagtggcggattgtcctgttcagcaaggcgacagcg
gctacacttgcggacaagaacgcacaagataaagtggatattgtaatcagtacgccatta
cggatggtcgccgccctgcagtcaggcaaccttaagctgagcaacgtgcgtcatctagtt
ctggatgaagctgatcgtatgctggatcctgaattcttggaacaaatacgagagatcata
gccgcatgtagctatccccgagtacagaaggctgtattcagcgcgacgcttcctgcgaac
gcggaaaggatagctatggacatgatgaccaatcctatacgagtcgttgtcggtctaaaa
gacacaccgctgccgttaattgcccaatcgctgacttacgtacatgacgactcctcgaag
ctgcctacattgctgcagtaccttgcacaaccctacaacccacctgttctggtgttcgta
tcgacgcaaccgcgcgcatcatcactcgccgaagagcttgtgctaaacgacattcaaaat
gtcgactgtctccatgcgggcatgagcaagaaggagcgagaggatgctgtgtcgcgcatg
cgcaagggtgaaagctgggtgatggtgactacagaggttatggcacgtggtatggacttc
aaaggcgtgcgcgaggtcatcaactacgacttcccccaaagtgtgcagagctatgtccac
cgcatcggtcgtacgggacgtgccggcagagagggcaaggccgttacttacttcacagat
gaagacgctcccttcttgaagaccatcgcgaacgttatcctccaatctgggtcgactgtg
ccggaatggatcctcaagctgcccaagccgtccaaaatgaagcggcgcgagatgggcaag
gtaaagcgcgcagatgcggtcaactctgctcgccgaatcggcaggcaagaggcaatcaag
aagaggtgcatggtcaaagcgtcgaagaggcggaaggagcgcgtgatacagatagcccat
ccacaacgcggcgacgggaagccttcggaagccgctgagaatgcagagtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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