KEGG   Propithecus coquereli (Coquerel's sifaka): 105817274
Entry
105817274         CDS       T08746                                 
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
  KO
K12813  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:5.6.2.6]
Organism
pcoq  Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcoq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105817274 (DHX16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcoq03041]
    105817274 (DHX16)
Enzymes [BR:pcoq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     105817274 (DHX16)
Spliceosome [BR:pcoq03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    105817274 (DHX16)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    105817274 (DHX16)
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD HA2_N AAA_22 AAA_19 AAA_30 SecA_DEAD nSTAND3 Flavi_DEAD SRP54
Other DBs
NCBI-GeneID: 105817274
NCBI-ProteinID: XP_012508365
Ensembl: ENSPCOG00000013298
UniProt: A0A2K6ETC7
Position
Unknown
AA seq 1044 aa
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKVVVEKPARAAEREARALLEKNRSYKLLEDSEDSSEETVDRAGSSLQK
KRKKRKHLRKKHQEEEEEEEEEASEKGKRKTGGSNQQTEKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHEQRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEEPSAPSPSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWVESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHSKKMPKKIGKTREELG
NT seq 3135 nt   +upstreamnt  +downstreamnt
atggcgacgccggcgggcctggagcgctgggttcaggacgagctgcactcagtgctgggg
ctgagcgagcggcacgttgctcagttcctgatcggtacagcacaacgctgcgcctctgca
gaggagttcgtgcagcgcctgcgagacaccgataccttggacctcagcgggccggcccga
gacttcgccctgagactctggaacaaggtaccgcggaaagtggtggtagaaaagccagct
cgggcagcggagcgagaggcccgagccctgctggagaagaaccgatcttataagttgctg
gaagacagtgaggacagcagtgaggagactgtggatagagctgggagcagcctccagaag
aagcgtaaaaaacggaaacacctcaggaaaaagcaccaggaggaagaggaagaagaggag
gaagaagcttctgagaaagggaagaggaagacaggggggagtaatcagcagacagagaag
cccgagtcggaggatgagtgggaacggacagagcgagagcgccttcaggacctggaggaa
cgtgatgcctttgcagagcgggttcggcagcgggacaaggatcggactcgaaatgtcctg
gagcggtcagacaagaaggcttatgaagaggctcagaagcgcctaaagatggctgaggaa
gaccggaaagccatggttcctgagctgcggaagaaatcccggcgagagtacctggctaag
cgggagcgagagaagcttgaggacctggaggcagagctggccgatgaggagttccttttt
ggggatgtggagctgagccggcatgagcagagggagctcaaatataagcgacgtgtgcgg
gatctggcccgggagtaccgggccgctggggagcaggagaagctggaggccaccaatcgc
taccacatgcccaaggagaccagaggacagccagctcgagctgtggatctagtggaggag
gaatcaggcgccccaggggaggagcagcggcgctgggaggaggcccggctgggggcagcg
tccctaaagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtgctg
gaggaggaagaaaccatcgagtttgtccgggccactcagctccagggtgacgaggagccc
tcagctccatccccttcaacccaggctcagcagaaagagtccatccaggccgtccgccgc
agcctcccagtgttcccattccgagaggagctcctggcggccattgctaatcatcaagtc
ctcatcatcgaaggcgagacaggctcagggaagaccacccagatcccacagtatctcttt
gaggagggttacacaaagaagggtatgaagattgcctgcacccagccccggagagtggcg
gccatgagtgtggctgcccgagtggcccgggagatgggtgtgaagcttgggaatgaggtt
ggctatagcatccgctttgaggactgcacgtcagagcgaactgtcctgcgctacatgaca
gatgggatgcttctccgggagttcctctctgagcctgaccttgcgagttacagcgtggtg
atggtggatgaggctcatgaacggaccctacacacagacattctctttggattgatcaag
gatgttgctcgcttccgacccgagctcaaggtcctagtggcttcagccacactggacact
gcccgcttttccaccttctttgacgatgcccctgtgtttcgaatccctgggcgcaggttt
ccagtggacatcttctatactaaggctccagaggctgactacttggaagcctgtgttgtg
tctgtgctgcagatccatgtaacccagccccccggggatatcctggtgttcttgacagga
caggaggagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctcc
aagatccgggagctcctggtgctgcccatttatgccaacctgccctctgacatgcaggct
cgtatcttccagcccacgccccctggggcacgaaaggtggttgtggcaacaaacatcgcc
gagacgtcactcaccattgagggcatcatttacgtgctggatccggggttctgtaagcag
aagagctacaacccccgcacaggcatggaatcactcactgtcacaccctgcagcaaggcc
tcagccaatcagcgagctggccgggcaggtcgggtggccgcagggaagtgcttccgcctt
tatactgcctgggcctatcagcatgaactcgaggaaaccacggtgcctgagatccagagg
accagcctgggcaatgttgtgttgctgctcaagagtttaggtatccatgacctaatgcac
tttgatttcctggatcctcctccgtatgagaccctgctgctggctttggagcagctgtat
gctttgggagccctcaaccacctcggggagctcaccacgtctggtcgaaagatggcagag
ctgcccgtggaccccatgctgtctaaaatgatcttggcctctgagaagtacagctgttca
gaggagatcctgacagtggctgccatgctctctgtcaacaactccatcttctaccgaccc
aaggacaaggttgtccatgctgacaatgctcgtgtcaacttcttcctccctggtggtgac
cacctggttctgctaaacgtttacacacagtgggtcgagagtggctactcttcacagtgg
tgctacgagaactttgtacagttcagatccatgcgccgagcccgggatgtgcgggaacag
ctggaggggctcttggaacgtgtggaagttggtctcagctcctgccagggggactatatc
cgtgtacgcaaggccatcactgctggttacttttaccacacagcacggctgactcgtagt
ggctaccgaacagtgaaacagcagcagacagtgttcattcaccccaactcctccctcttt
gagcagcagccacgctggctgctttaccacgaacttgtcttgaccaccaaagagttcatg
agacaggtattggagattgagagcagttggcttctggaggtggctccccactattataag
gccaaggagttagaagatcctcattctaagaaaatgccaaaaaaaataggcaagacacgg
gaagagctggggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system