KEGG   Pseudomonas chlororaphis subsp. aurantiaca: JM49_12840
Entry
JM49_12840        CDS       T03338                                 
Name
(GenBank) EvpB family type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
pcp  Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:pcp00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    JM49_12840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcp02044]
    JM49_12840
Secretion system [BR:pcp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JM49_12840
SSDB
Motif
Pfam: VipB VipB_2 BMFP
Other DBs
NCBI-ProteinID: AIS12534
Position
complement(2786631..2788127)
AA seq 498 aa
MAELMKDPQAQADAAIEQPSDFAALLLQEFKPKTEHAREAVESAVRTLAEQALSKTELIS
NDAIKSIESIIAAIDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVMS
IAKGDLHKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPFGCLVGDYYFDQSSPDVELLG
ELAKVCAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAAWRSLRDSDDSRYI
GLTMPRFLARLPYGAKTDPVDAFAFEEETNGADSSKYTWANSAYAMAVNINRSFKLYGWC
SRIRGVESGGEVPNLPTHTFPTDDGGVDMKCPTEIAIADRREAELAKNGFMPLLHKKNTD
LAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDD
MQRWLQNWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYSSKFYLRPHYQLE
GLTVSLRLVSKLPSAKAV
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggccgaattgatgaaagacccgcaggcccaggcagacgccgcgatcgaacaaccgagc
gacttcgccgccctgctcctgcaagagttcaagcccaagaccgagcacgcccgcgaggcg
gtggaaagcgccgtgcgcaccctggccgaacaggccctgagcaagaccgagctgatctcc
aacgacgcgatcaaatccatcgaatcgatcatcgccgcgatcgatgccaagctcaccgcg
caggtcaacctgatcatgcatcacgccgacttccagcaactggaaagcgcctggcgcggc
ctgcactacctggtcaacaacacggaaaccgacgagcagctgaagatccgcgtgatgagc
atcgccaagggcgacctgcacaagaccctgaagaagttcaagggcaccgcctgggaccag
agcccgatcttcaagaaaatgtacgaagaggaatacggccagttcggcggcgagccgttc
ggctgcctggtgggcgattactacttcgaccagtcgtcgccggacgtcgagctgctcggc
gagctggccaaggtctgcgcggcgatgcatgcgcctttcatcagcgcggcctcgccgacg
gtgatgggcatgggctcctggcaggagctgtccaacccgcgcgacctgaccaagatcttc
accacaccggaatacgcggcctggcgttcgctgcgcgattccgatgattcgcgctacatc
ggcctgaccatgccgcgtttcctcgcccgcctgccctacggcgccaagaccgacccggtg
gatgccttcgccttcgaggaagaaaccaacggcgccgacagctccaagtacacctgggcc
aactcggcctatgccatggcggtgaacatcaatcgctcgttcaagctctatggctggtgc
tcgcggattcgcggcgtggagtccggcggcgaagtgccgaacctgccgacgcacaccttc
ccgaccgacgacggcggcgtggacatgaagtgcccgaccgaaatcgccatcgccgaccgg
cgcgaggcggagctggcgaagaacggcttcatgccgctgctgcacaagaagaacaccgac
ctcgccgccttcatcggcgcgcaatcgctgcagaagccggccgagtatgacgaccccgac
gccaccgccaacgccaacctggcggcacgcctgccctacctgttcgccacctgccgcttc
gcccattacctgaagtgcatcgttcgcgacaagatcggctcgttcaaggaaaaggacgac
atgcagcgctggctgcagaactggattctcaattacgtggacggcgacccggcccactcc
accgaaaccaccaaggcccagcaccccctggccgcggcggaggtggtggtcgaggaggtc
gagggcaatcccggttactacagctcgaagttctacctgcgcccgcactaccagctcgaa
gggctcacggtatcgctgcggctggtatccaagcttccatccgccaaggcggtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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