KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_2497
Entry
PC1_2497          CDS       T00934                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct03030  DNA replication
pct03430  Mismatch repair
pct03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PC1_2497
   03430 Mismatch repair
    PC1_2497
   03440 Homologous recombination
    PC1_2497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pct03032]
    PC1_2497
   03400 DNA repair and recombination proteins [BR:pct03400]
    PC1_2497
Enzymes [BR:pct01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PC1_2497
DNA replication proteins [BR:pct03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PC1_2497
DNA repair and recombination proteins [BR:pct03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PC1_2497
SSDB
Motif
Pfam: DNApol3-delta_C DNA_pol3_delta2 HolB_lid
Other DBs
NCBI-ProteinID: ACT13528
UniProt: C6DKS7
Position
complement(2865025..2866035)
AA seq 336 aa
MEWYPWLNASYRQLIGQYQAGRGHHAVLLHALPGMGDESLIYALSRWLICQRPDGMKSCG
HCHSCNLMTAGTHPDWHVLSPEKGKQSLGVDPVRDVVEKVYQHARQGGAKVIWLSAAEQL
TEAAANALLKTLEEPPQNTFFLFGCREPARLLATLRSRCLYHYLDVPTETQSVLWLNARH
RHDGKALRTALRLQSGAPLAAEALLQPEQWKQRSGLCQAFSAALTSRDQLSLIPQLNHDD
ADTRIHWLATLLLDAMKWQRGASEHLVNQDQIELVEHLAREPSVHLQYELQQWLVCRQKL
LTVTGVNRELLLTERLLDGERTFASSVKRDSHPFSV
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggagtggtatccgtggctgaatgcatcttatcggcaactcatcggtcagtatcaggcg
ggcagggggcaccatgcggtgttattgcatgcgttgccgggtatgggcgatgaatcgctg
atttatgcactgagtcgctggctgatctgccagcggcctgatggcatgaaaagctgcggc
cactgtcactcctgcaacctgatgacagcgggaacgcatccagactggcatgtgctgagt
cctgagaaaggcaagcagagtttgggcgtcgatccggtgcgtgacgtcgtggaaaaagtg
tatcaacacgcccgacaaggcggagcaaaagtgatctggctgtctgccgcagagcaactg
acagaagcggccgcgaatgcgctgctaaaaacgctggaagaaccgccacagaataccttc
tttttatttggctgccgcgaaccggccaggctgctggcaacgttgcgtagccgttgcctg
tatcactatctggatgtcccgactgagacgcagagcgtgttgtggctgaatgcccgccat
cgccatgacggtaaggcattgcgcacggcattgagactgcaatcgggcgcgccattagcc
gccgaagcgttattgcagccagagcagtggaagcagcgtagcggactgtgtcaggcattt
tctgccgcgctgacttcacgggatcagctctcgttgattccgcagctgaatcatgacgat
gcagatacccgcattcactggctggccacgctactgttggatgccatgaaatggcagcgg
ggggcgagcgagcatttggtgaatcaggatcagatcgaactggttgagcatctggcgcgt
gaaccctccgtgcatttgcagtatgagctgcaacagtggctggtttgtcggcaaaaattg
ctaaccgttacgggcgtaaatcgtgaattgttgctgacagaacgcctgcttgatggggaa
cgtacgtttgcttcgtcggttaagcgcgacagccatcctttttctgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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