KEGG   Pectobacterium carotovorum subsp. carotovorum PC1: PC1_4177
Entry
PC1_4177          CDS       T00934                                 
Name
(GenBank) ABC transporter related
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
pct  Pectobacterium carotovorum subsp. carotovorum PC1
Pathway
pct02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pct00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PC1_4177
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pct02000]
    PC1_4177
Transporters [BR:pct02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    PC1_4177
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N oligo_HPY AAA_22 AAA_16 AAA_29 nSTAND3 AAA AAA_25 AAA_33 NACHT AAA_24 MobB AAA_23 PRK SRP54 TsaE Zeta_toxin AAA_30 SbcC_Walker_B AAA_17 TrwB_AAD_bind APS_kinase DUF87 NB-ARC AAA_19 ATP-synt_ab NTPase_1 CbiA
Other DBs
NCBI-ProteinID: ACT15191
UniProt: C6DJ92
Position
4715448..4717133
AA seq 561 aa
MSLSASLQTSAAVPVLALENVTIAYRSDDREQTVVEGVSFHIQPGEVVALVGESGSGKTT
TAQAVIGLLAENGRLTRGAIRLNGVDISDWSQKRLDSVRGAQISLIPQDPTSSLNPVQTI
GEQVDEILRIHQREDRQTIRQKTLALLERVGLNQPELRAKQYPHELSGGMKQRVLIAIAI
ALKPALIIADEPTSALDVTVQKRILDLLDELRRENGTAVLFVTHDLGVAAERADRLLVFQ
NGYIQEQGPTLEVLSAPSSHYARTLLANVPSLNPTPRPPRNHASDIIVSVENLVQTFPLS
GRKGEHFRAVDDVSFSVARGTTHAIVGESGSGKTTTARSLLGFHHPSAGRILIDGTDITH
LKGEALRQFRQKIQLVYQNPFGSLDPSQRLYDIVEEPLRNFNRHTAAQREQKIHEMFERV
ALPAALLSRKPRELSGGQRQRVAIARALVLEPQVLVLDEAVSALDVTVQAQILRLLAELQ
ESLGLTYLFISHDLAVVRQIADTVSVLYHGKQLESGPVEQIFAHPEHRYTRELIEAIPGQ
QHPAFARPHHSETKVALNQGQ
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgagcctgtcagccagcttacaaaccagtgcggcggtgcccgtactggctctggaaaac
gtcacgattgcctaccgcagtgacgatcgcgagcagaccgtcgtggaaggcgtctctttt
catattcagcccggtgaagtcgtcgcactggtgggggagtccggttcagggaaaaccacc
accgcacaggcggttatcggtttgctggccgagaacggacggttaacacgcggtgccatt
cggctcaacggcgtggatatcagcgactggtcgcagaagcggttggacagcgtgcgcggt
gcgcagatcagcctgatcccgcaggatcccaccagttccctgaatccggtgcagaccatc
ggcgagcaagtggacgaaattctgcgtattcatcagcgggaagatcgccagactatccgc
cagaaaacgctggcgctgctggaacgcgtggggctaaaccagccggagctgcgagcgaaa
cagtatccgcacgagctgtccggcggcatgaaacagcgcgtcctgatcgcgattgccatt
gcgctaaaacctgcgctgattattgctgatgagcccaccagcgcgctggatgtcaccgtg
cagaaacgtattctcgatctgcttgatgaactgcgacgcgaaaatgggacggcggtgctg
ttcgttacgcacgaccttggggtcgcggccgagcgtgccgatcggctgctggtcttccag
aacggctacattcaggaacaggggccaacgcttgaggtgctaagcgcgccctcaagccac
tatgcccgcacactgctggcgaacgtgccgtcgcttaacccaacgccgcgtccaccgcgc
aaccatgcatccgacatcattgtctcggtcgaaaatctggtacagaccttccccttatcg
ggtcgtaaaggggaacattttcgggccgtggatgacgtctctttcagcgtggcacgcggc
acaacgcacgccattgtcggcgaatccggctcgggtaaaaccaccacagcgcgcagcctg
ctcggatttcatcaccccagcgccgggcgcattctgatcgacggtaccgatatcactcac
ctgaaaggcgaagcgctacggcagttccggcagaaaattcagctggtctaccaaaatccc
tttggttcactcgatccctcacagcggttatacgacatcgtcgaggaaccgctgcgcaat
tttaatcgccataccgccgcgcagcgggagcaaaaaattcatgagatgttcgagcgcgtc
gccctgcccgccgcgttgctgtcacgcaagccgcgtgaactgtccggcggccagcgacaa
cgtgtcgccatcgcccgggcgctggtgctggaaccgcaggtactggtgctggacgaggct
gtctcggcgctggatgtcaccgtgcaggcgcagattctacgtttgctggctgaattgcag
gaatcacttgggctgacatatctgttcatttcgcacgatttggcggtcgtgcgccagatc
gccgacaccgtttccgtgctgtaccacggcaagcagcttgaatccggcccggtagagcag
atcttcgcccatcccgaacatcgctacacccgtgaactcatcgaggccattcccgggcag
caacacccggcttttgcccgcccgcatcactctgaaaccaaagtggcactaaaccaagga
cagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (39)   

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