KEGG T05196: LPB68

Paenibacillus crassostreae: LPB68_14955

Entry

LPB68_14955       CDS       T05196

Name

(GenBank) tRNA pseudouridine(38-40) synthase TruA

K06173

tRNA pseudouridine38-40 synthase [EC:5.4.99.12]

Organism

pcx Paenibacillus crassostreae

Brite

KEGG Orthology (KO) [BR:pcx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcx03016]
    LPB68_14955
Enzymes [BR:pcx01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     LPB68_14955
Transfer RNA biogenesis [BR:pcx03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LPB68_14955
Prokaryotic type
    LPB68_14955

SSDB

Motif

Pfam:

PseudoU_synth_1 DUF2344 Sigma70_r1_1 Imm52

Other DBs

NCBI-ProteinID:

AOZ93386

UniProt:

A0A167E7T5

Position

3268433..3269221

AA seq 262 aa
MRNLCMKVSYDGTHYNGFQTQPDGRTIQDQLEKAIKMLSDEDVKIIASGRTDAGVHAYGQ
VFNFLTQSHIPVERWPMALNTRLPDDIVVREAIEVPELFHARYSAKQKTYRYTVNANQFI
DVFQRHTQFHHHGKLNIEAMQRAIKHFIGTYDFTSFASRRSTKTSHIRTLFDAYMVVDKS
MCRSSTYDQGVIHTYVTGSGFLQHMVRIMMGTLLEVGEGKKSPDDITAIIAAEDRSKAGP
TAVSKGLILWDVEYNDFPKKTF

NT seq 789 nt +upstreamnt +downstreamnt
ctgcgcaacttatgtatgaaggtcagttacgatggtacacattataacggctttcaaaca
cagcctgatggtagaacaattcaggatcaacttgagaaggctataaagatgctttctgat
gaagatgtaaagattatagcatcaggtcgtacggatgcaggtgtgcacgcctacggtcag
gtattcaatttcttgacgcaatctcacattccagtagaacggtggccgatggcacttaat
actagactaccggatgatattgttgtcagagaagcaattgaagtgccagaactctttcat
gctcgttattcagcaaagcagaaaacatatcgttatacagtaaatgctaatcaatttatt
gatgtgtttcagcgtcatactcaatttcatcatcatggaaaattaaacatcgaggctatg
caaagagctataaagcacttcatcggaacttatgatttcacatcatttgcttcaagacgt
tctacaaagacttctcatattcgaacattatttgacgcatatatggttgtggataaatcg
atgtgtagatcttctacctatgatcaaggtgttattcatacgtatgtaaccggcagtggc
tttttacagcatatggttcgtattatgatgggcactttgctagaagtgggagaaggtaaa
aagtctccagatgatataactgcgataatagcagctgaagatcggtcgaaagctggtcca
actgctgtgagcaaaggtctaattttatgggatgtagaatataatgattttccgaaaaaa
actttctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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