KEGG   Plasmodium cynomolgi: PCYB_146100
Entry
PCYB_146100       CDS       T02490                                 
Name
(RefSeq) hypothetical protein
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
pcy  Plasmodium cynomolgi
Pathway
pcy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PCYB_146100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pcy03000]
    PCYB_146100
   03019 Messenger RNA biogenesis [BR:pcy03019]
    PCYB_146100
   04121 Ubiquitin system [BR:pcy04121]
    PCYB_146100
Enzymes [BR:pcy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     PCYB_146100
Transcription factors [BR:pcy03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    PCYB_146100
Messenger RNA biogenesis [BR:pcy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PCYB_146100
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PCYB_146100
Ubiquitin system [BR:pcy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    PCYB_146100
SSDB
Motif
Pfam: zf-RING_4 RRM_1
Other DBs
NCBI-GeneID: 14695563
NCBI-ProteinID: XP_004225128
UniProt: K6UEY9
Position
14:2323390..2328021
AA seq 1524 aa
MKKGGSTDKRYLRRAFNRSYYYKKGEKAEEVSSGSKRVNGIAESSASGSTSERNNPNTGT
NASGKGAPNGASANGKGAAAGSKGKDVDVQSEEDPWDREREGADLDDEQLFYAVEGEAKN
RKVAKMTLNAKEKELLPKNEEECTNGSSANGKVLDETDRNFFPCDCGYQICLWCLYYIRD
HMCNKCPACRRSYDEKNFIYNRETHEKLVKKQKNNHKGSKTDANNTSNNNSTSAPNGVIA
SSGTGATTGVSNCTSPTNNTFLHHYSGTSSAIFNRPELYKNANTYNIHEHENLFEIIKGI
RVVQRNLVFVIGITSNYAKKNVLKKNEYFGKYGQILNIIVNKSQAYNPHYNGPSFSAYIT
YSNEKEAINAIYFIDGMVLDSKTLKASFGTTKYCASYLKNSTCTNEDCFYLHELGNVIDS
FSKDDIHGPKHIYHDLLYFYFKKHPDKKNEQSNNSHECSGTVVVKSARKSDDATIGGVAA
SGGGTSTSGPSAMPSFAAAMSITNEKDLADAKRKSDTLDEATHSKKQHSSATSVLSDGKA
KGLEVAGKGVERWADRGADKAADRGADKAAEEAKRDTKLKDGLASKGSKDNHHAGEEKSK
WSSEGNFASLIKNAGVATTSLQEVEEEKNNAQTKSKKKKKKQKSEEMIPPTDRGKEDHGA
SASASVNASVNASVGASASASAAQKEKNYRDSLQSNGASKNDNTSKNNSLDVEEDPYYVD
GMSENYPLITDVHFDKDKKKKMKKKAEKKKANERKKAEEVKMREAKEGEAKVGEAKVGEA
KVGEAKVGEAKVGEEKLGKAKPGESKLGESKLGEAKLGEAKLGEAKLGEAKTGAVKTGAV
KTGAAKTGAAKTGKAPTEEPPAEERKLDGKGGQSASDAVQKEQPSQKDFPPLREDDKDAK
KQKKKHPNGGSSAVNVSISGSINGSASGSVENKPAHVEDQPADGPKEKKQTGEQVQEEKK
SKYAKMTFKIGSFFNDLFDGSRKGGGGDEAKAKASPSVSQKANKKAPATVVTPSVVVAAE
DVQVGSAAQSKEEPSAEGAMSSKQKKVKGYEAEQEETNMKEDKMREKGERRKNEQSSQKK
DMEKVKADVGVGAKEKKEVVEEGAKKDRGGGSINQADKEDTPIGEGKIVRDSLGDDVAAT
AIATPCDTVNPPRTREKRDKKGAQDSNISQEEQMKKHAQEVLNIQKNNPDVPLQAIIEDF
IGRRTVATKEVLHFDDLNSAINSLIVENAAKGERSNNQHTGDSTAHACNVNTKEHLRNGE
GDEKKGDSAQMKEAEKVGAVKREGEGQAVEKTQKGMDSKNHVPCAKEKKKKDTLNKRKLQ
QKDMEGDVTSIIREMMMQRMTSKSRRNKNGSVRETSGKSEMGQADARISSGEDPTEKNAL
FDDMEIFLKNLCAAKGKAIQSSVGSNHQSSVGSNHQSSVGSNHQSNPQRNHQSNHQSNYQ
SNHQSNHQSNHQSTPQSSYADSDAVYLIEGNGRPKNDYLMYTGDEHISLKSHKGVMEFII
KKEKNVDVKKKIISTKIHLIFIKN
NT seq 4575 nt   +upstreamnt  +downstreamnt
atgaagaaggggggctccactgacaagcgctacttacggagggcattcaacaggtcctac
tattacaagaagggggaaaaggctgaggaggtgagcagtgggagtaaaagagttaacgga
atcgcggagagcagcgcgagtgggagcaccagcgagaggaacaaccctaacaccggtaca
aacgcgagtggcaaaggcgccccaaacggcgcgagtgcgaacggaaagggcgccgccgcg
ggcagcaaggggaaagacgtggatgtgcagagtgaagaagacccatgggacagggagcgt
gaaggagcagatttggatgacgagcagttattttacgccgtggaaggagaagcgaaaaat
agaaaagtcgcaaagatgacactgaacgcgaaggagaaggagttgctccccaagaacgaa
gaagaatgtaccaatgggagcagcgcgaatggaaaggtgttggacgagacggatagaaat
tttttcccctgcgattgtggttatcagatatgtctttggtgcttgtactacatacgagac
cacatgtgcaacaagtgccctgcttgtaggagaagttacgacgaaaaaaatttcatatat
aatagggagacccacgaaaaattggtgaaaaagcaaaaaaataatcacaagggaagtaaa
acagatgcaaataacaccagtaataataactccacgagtgctcccaacggagttatcgcc
tcttccgggacgggagcaactaccggagttagcaattgtacaagtcctaccaacaacact
tttcttcaccattacagtggaacgagcagtgccatttttaacagaccggaactgtacaaa
aatgcaaacacatataatatacacgagcatgaaaatttattcgaaattataaaaggaatt
agagtcgttcaacgcaacctcgtctttgtcattggtataacatccaactatgccaaaaaa
aatgtattaaaaaaaaacgaatattttggaaaatacggacaaattcttaacattattgtg
aataaatcccaggcttacaatcctcattacaatggcccgtcatttagtgcatacataacg
tatagtaacgagaaggaggctattaatgctatttattttattgatggtatggtcctggat
agcaaaacgctgaaggcatcgtttgggaccaccaagtactgtgcttcatatctgaagaac
agcacctgtaccaatgaggactgcttctacttacacgaattgggcaacgtcatagatagc
ttttccaaagatgatatacatggcccaaaacacatttatcatgacttgttatatttttat
tttaaaaaacacccagacaagaaaaacgagcagagtaataactctcatgagtgttccggt
actgtggtggtaaagtcggctagaaaatcggatgatgcaactatagggggagtggcagca
tccggaggaggcactagcacaagtggtccctccgcgatgccttcctttgctgcggccatg
tccatcacaaatgagaaggacttagccgacgcgaagagaaagagcgacacgctggatgag
gccactcactcgaagaagcagcactcgtcagcgacgtcggtgctctccgatgggaaggca
aaagggttggaggtagccggcaaaggggtagaaaggtgggcggacagaggagcggacaaa
gcagcggacagaggagcggacaaagcagcggaggaggcgaagagagacaccaagctgaag
gatggcttggccagcaaggggtccaaggataaccaccacgccggtgaggagaaaagcaag
tggagctccgaaggcaatttcgccagtctgataaagaatgctggcgtggcgaccacctcc
ttgcaggaggtggaagaagaaaaaaacaacgcacagaccaagagcaagaagaagaagaaa
aagcaaaagagcgaggagatgatcccgcccaccgatcggggcaaggaagaccacggtgcg
agtgcaagtgcgagtgtaaatgcgagtgtaaatgcgagtgtaggtgcgagtgcgagtgcg
agtgccgcgcagaaggagaagaactatagggactccctccaaagtaacggcgcatccaag
aatgacaacaccagtaaaaacaacagcctcgatgtggaggaggacccctactacgtcgac
ggcatgtcggagaactacccgctcataacggatgtccatttcgacaaagataagaaaaag
aagatgaaaaagaaggcagaaaagaagaaggccaacgagaggaagaaggcggaggaggtc
aagatgcgcgaagcgaaggagggagaagcgaaggtgggcgaagcgaaggtgggagaagcg
aaggtgggcgaagcgaaagtgggcgaagcgaaagtgggcgaagagaagttgggaaaggcc
aagccgggagagtccaaactgggagagtccaaactgggagaggccaaactgggagaggcc
aaactgggagaggccaaactgggagaggccaaaaccggtgcagtcaaaaccggtgcagtc
aaaaccggtgcagccaaaaccggtgcagccaaaacgggaaaggcccccacggaagaaccc
cctgcggaagagcgcaagcttgatggcaagggcggacaatcagcttcggacgctgtgcag
aaggagcagccctctcagaaggacttcccccctctgagggaggacgacaaggatgctaag
aaacaaaagaagaagcaccccaacggcggtagcagtgccgtcaacgtgagcatcagtgga
agcatcaatggcagcgccagtggcagcgtggagaataagccagctcatgtggaagaccag
ccggcagacggtcccaaggagaagaagcaaaccggcgagcaggtacaggaggagaaaaaa
agcaagtatgccaaaatgacattcaaaattggaagcttctttaatgatctctttgatgga
agtagaaaagggggtggtggtgacgaggcaaaggcgaaggcatctcccagtgtgagtcag
aaggcaaacaagaaagcgcctgccactgttgttactccctctgtggtggtagcagcggag
gatgtacaggtgggaagcgccgcccagtcgaaagaagaacccagcgcggaaggggcaatg
tcttcaaagcaaaagaaggtgaaaggttacgaagcggaacaggaagaaacaaacatgaaa
gaggataaaatgagagagaagggagagaggaggaagaatgagcaatcctctcaaaagaag
gacatggaaaaggtgaaagctgatgtaggagttggtgcaaaggagaagaaggaagtagtg
gaagagggggccaagaaggacaggggtggtggatctatcaaccaagctgataaggaggac
acacctattggagaaggcaaaattgtacgtgactcactcggagatgacgtcgcagcgact
gctattgctactccatgtgacacggtgaaccctcctcgcacacgagaaaagcgagacaaa
aaaggcgcacaagatagtaatattagtcaggaagaacagatgaagaagcacgcccaggaa
gtattaaatattcaaaaaaacaacccagatgtgcccctccaagcaataattgaagatttt
atcggaaggagaacagtcgccacgaaggaggttctccattttgatgacctcaacagtgcg
ataaatagccttatcgttgagaatgcagcgaaaggggaaaggagtaacaaccaacataca
ggcgatagtactgcccacgcttgcaatgtgaatacgaaggagcatctgcgtaacggagag
ggagatgaaaagaagggtgactctgcacaaatgaaagaggcagaaaaagtaggggctgtg
aagcgagagggggaaggacaagcagtcgaaaagacacagaaggggatggactcgaagaac
catgtaccatgtgcgaaagagaaaaagaaaaaggataccctgaacaagaggaagctgcag
cagaaagatatggaaggagatgttacgagcattattagagaaatgatgatgcagaggatg
acgtcgaaaagtaggagaaacaaaaatggatctgttcgcgaaacgagtgggaagagcgag
atggggcaagcggatgcgcgcatcagttcaggggaagaccccacagagaaaaatgccctt
ttcgacgacatggaaatatttttaaaaaatctgtgtgcggctaaggggaaggcaattcaa
agcagcgttggaagcaaccaccaaagcagcgttggaagcaaccaccaaagcagcgttgga
agcaaccaccaaagcaaccctcaaagaaaccaccaaagcaaccaccaaagcaactaccaa
agcaaccaccaaagcaaccaccaaagcaaccaccaaagcacccctcaaagcagttacgca
gatagcgacgccgtctatttgatagaaggaaacgggaggcccaaaaatgactacctcatg
tacacaggtgacgagcacatttccctcaaatcacacaaaggtgttatggaatttatcatt
aaaaaggagaaaaacgtagacgtaaaaaaaaaaattatctccacgaagatccatttgata
tttataaagaattaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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