KEGG   Phoenix dactylifera (date palm): 103703018
Entry
103703018         CDS       T03274                                 
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2
  KO
K13117  ATP-dependent RNA helicase DDX35 [EC:5.6.2.6]
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103703018
Enzymes [BR:pda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103703018
Spliceosome [BR:pda03041]
 Complex C
  Other components
   Complex C specific factors
    103703018
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 HA2_N AAA_19 AAA_30 AAA_7 ResIII nSTAND3 Helicase_RecD AAA_11 AAA_29 T2SSE RVP_2 AAA_23 TrwB_AAD_bind
Other DBs
NCBI-GeneID: 103703018
NCBI-ProteinID: XP_008783931
UniProt: A0A8B7BRM8
Position
8:complement(19435365..19472723)
AA seq 692 aa
MSKYWKPGSERPRTVLVDDEEGGVLFLSSPPSSSGFGHSSLERQRQRLPVYKYRTAILYL
VENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQSVASRVAEEMGV
KLGEEVGYTIRFEDQTKPNVTKIKFLTDGVLLREMMDDPLLIKYSVIMVDEAHERSLSTD
MLLGLLKKVQRRRPQLRIIISSATIDAKSMSTFFHIRRRNIGQAAEDPTPSELPAILSVE
GKGYNVEIHYVEEPVSDYLQAAVNTVLSIHDKEPPGDILVFLTGQDDINAAVQLLTEDAQ
NNGLLVLPLFSGLSRADQDLIFSPTPKGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQR
FYNPIPDIENLVVAPISKASARQRAGRAGRVQPGKCFRLYTEEYFVKEMPAEGIPEMQRS
SLVSCVIQLKALGIDNILGFDWLASPSPEAMIRALEVLYSLGILDEDAKLTSPTGFQVAE
IPLDPMISKMILSADTYGCSEDIITIAAVLSVQSIWISVRGAQKEFDEVKLRFAAAEGDH
VTYLNVYKGFIHSGKSSQWCYKNYINYHAMKKVIDIREQLSRLLRRLGIVLKSCERDTQV
LRKAIIAGFFAHACCLEEFSPNGMYKTIKSSQEVYIHPSSVLFRVNPKWVVYHSLVSTDK
HYMRNVIAIDPSWLIEAAPHFYQVRKPNPAPY
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgtccaagtactggaagccaggctccgagaggcctcggacggttctcgtcgacgatgaa
gaaggcggagtgctcttcctttcctctcctccctcctcctctgggttcgggcattcaagt
ctggagaggcagcggcagaggcttccggtgtataaatatcggaccgcaattctttatttg
gtagagaatcacgccacaaccataatcgttggagagacgggaagcggaaagaccacccag
ataccacaatatcttaaagaggcaggttgggctgaaggtggtcgagttatagcttgtacc
cagccaagacgattggctgttcagtccgttgcctcacgggtagctgaagagatgggtgtc
aaacttggagaagaggttgggtatactattcgttttgaggatcaaacaaaaccgaatgta
accaagatcaaatttctaactgatggggtcttgcttagagaaatgatggatgatcctctg
ctgatcaagtacagtgtcataatggtagacgaggctcatgagagatccctttcaacagac
atgttactaggcctcttgaaaaaggtccaacgccgtagacctcagttgcgtataatcatt
tcatctgcaacaattgatgcaaaatccatgtcaacctttttccatattaggaggaggaat
ataggacaggctgcagaagatcccacacctagtgagctgcctgccatactttctgttgaa
ggaaaaggatacaatgtggaaattcattatgttgaggagcctgtctctgattatttacaa
gctgctgttaataccgtgctatcaattcatgataaggaaccacctggtgacattctggtc
ttccttacaggtcaagatgatattaatgctgctgtacagttacttacagaagatgctcaa
aacaatgggttgttagttttgccactattctcggggctttcacgtgcagatcaggacctc
attttttctcccactcccaagggaaaaaggaaagttgtcatatcaactaatattgctgag
acatcattgactttggagggaatagtgtatgtcgtggatagtgggttctcaaagcagcgc
ttttataatccaattcctgatattgagaacttggtggtggcaccaatatccaaggcttct
gcaagacaaagggcaggcagggctggaagggtacagccagggaagtgttttagactttat
actgaagaatattttgtcaaggaaatgcctgcagaaggaattccagaaatgcaaaggtca
agccttgtttcctgtgtgatacaattgaaagccttgggcatagataatatattgggcttt
gattggctagcttctccatcgccagaggcaatgatccgagcacttgaggttctctactcc
ctcggaattcttgatgaagatgccaaacttacatcacctactggttttcaagttgctgag
attccattagaccctatgatctccaaaatgatcttatcagcagatacatatgggtgttcg
gaggatataataactatagcagcagttctttctgttcagtctatctggatttctgttaga
ggagcacagaaggaatttgatgaagtgaagctgcggtttgccgctgctgagggagatcat
gtaacatacctgaatgtctacaagggatttattcactctggcaaatcttctcagtggtgt
tacaaaaactatataaattaccatgctatgaagaaggttattgacatcagggaacaactc
agcaggttattgaggcggcttggcatagttctgaaatcttgtgaaagagacacccaggtg
ctaagaaaggcaatcattgcgggtttttttgcccatgcatgctgcttggaggagttcagt
ccaaacggtatgtacaagacaattaagagttcccaagaagtatacatccatccatcttcc
gtacttttcagagtcaatccaaagtgggtggtctaccattctcttgtttccaccgacaag
cattatatgcgcaatgtaattgctattgatccatcctggcttattgaagctgcaccacat
ttctatcaagtccggaagcccaaccctgccccctactga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (18)   
   Pfam (18)   
All databases (41)   

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