KEGG   Phoenix dactylifera (date palm): 103707271
Entry
103707271         CDS       T03274                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12 isoform X1
  KO
K11838  ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    103707271
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pda01002]
    103707271
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pda04121]
    103707271
Enzymes [BR:pda01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     103707271
Peptidases and inhibitors [BR:pda01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   103707271
Ubiquitin system [BR:pda04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    103707271
SSDB
Motif
Pfam: USP7_ICP0_bdg UCH USP7_C2 MATH UCH_1 Malt_amylase_C
Other DBs
NCBI-GeneID: 103707271
NCBI-ProteinID: XP_038985458
UniProt: A0A8B9AN73
Position
8:30555550..30576248
AA seq 1117 aa
MTMMTPPPLDQQEDDEMLVPHPEFADGPQPMEAVAQTETATTAENQQVEDPPSSRFTWTI
ENFSRLNTKKHYSDIFIVGGYKWRVLIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFS
LAVINQIHNKYTIRKDTQHQFNARESDWGFTSFMPLSEVYDPTRGYLVNDTLVVEAEVAV
RRVVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSSRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
DNGKYLSPEADRTVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWFKFDDERVTKEDT
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEH
LRIRLKKEQEEKEHKKKEKAEAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRIQ
KQLPFNVFKEEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLSPQEEAQSVGQLREVSNK
AHNAELKLFLEVELGLDLRPLPPPDKTKEDILLFFKLYDPEKEELRYVGRLFVKALGKPS
EILTKLNELAGFSPNEEIELYEEIKFEPSVMCEHIEKKLTFRSSQLEDGDIICYQKSPAI
DSDDQFRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLELSKLHTYDDVVERVAHQLGL
DDPSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVVIHSIRLPKNSTVADVINDLKTKVELSHPNAELRLLEVFYHKIYK
IFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQMQVQNFGEPF
FLVIHEGETLAEVKARIQKKLQVLDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVY
GAWEQYLGLEHSDTAPKRAYTANQNRHTFEKPVKIYN
NT seq 3354 nt   +upstreamnt  +downstreamnt
atgactatgatgacccctccccctctcgatcagcaggaggacgacgagatgctggtccct
cacccagagttcgctgatggtccccagccaatggaagcagtagctcaaaccgaaactgct
actactgctgagaaccagcaagtggaggatcctccatcgtccaggttcacatggacgatc
gagaatttctcgaggctgaacaccaagaagcactactccgacatatttatcgtgggtggc
tacaaatggcgggtgctgattttcccaaaggggaacaacgtggaccacttgtctatgtac
ctggatgttgcggattcagcaaccctgccatatggctggagcagatatgcgcagttcagc
ctggctgtgatcaatcaaattcacaacaaatatacaatccgaaaagacacacaacaccaa
tttaatgcacgggaaagtgattggggattcacatctttcatgcctctaagtgaagtttat
gacccaactagaggatatcttgtaaatgatactcttgttgttgaagccgaggttgccgtt
cgcagggtggttgactactggacttatgactccaaaaaggaaacaggttatgttggccta
aaaaatcaaggagctacttgttacatgaactctcttctccaaactttgtaccatattcca
tacttcaggaaggctgtgtaccatatgcctacaactgaaaatgatatgccgtcgggaagc
attcccttggctctgcagagtctgttttataaacttcagtacagtgacagcagcgttgcg
acaaaagagctaacaaagtcttttggatgggatacatatgattctttcatgcagcatgat
gtgcaagaactcaatagggttctttgtgagaaattagaagataagatgaagggaactgtt
gtggagggcacaatacaacagttatttgaaggccatcatatgaattatatcgagtgcatt
aacgttgactacaaatctagcaggaaggagtctttttatgatcttcagcttgatgtcaaa
ggttgtcgggatgtttatgcttcttttgataaatatgttgaagtcgagcgtcttgaagga
gacaataagtatcatgcagaacagtatggtctgcaggatgctaagaaaggtgttcttttc
attgactttcctcctgttttgcaacttcagctgaaacgctttgaatacgatttcatgcga
gacaccatggtcaagataaatgaccgatatgagttccctctgcaactagaccttgatagg
gataatgggaaatatctttctccagaagcagacaggactgtccgcaacctttatactctg
cacagtgttcttgttcatagcggtggggtgcatggtggacattactatgcttttattcga
ccaactctctctgaacagtggtttaaatttgatgatgagcgggtaacaaaagaagataca
aagagggcactagaggagcagtatggtggtgaggaagagttgccacagacaaatcctggc
ttcaataacactccgtttaaatttacaaagtattcaaatgcatacatgcttgtttatatt
cgggagagcgacaaggagaaaataatatgtaatgtggatgagaaagacattgctgaacac
ctcagaataagattgaagaaagaacaagaagagaaagaacacaagaagaaggaaaaggct
gaggctcacctttatactatcataaaggttgctcgagacgaagatttagctgaacagata
ggaagggatatatattttgatctggtggaccatgataaagttcgcagctttcgtattcag
aaacaattgcctttcaatgttttcaaggaggaggtggcaaaagaatttggtatcccagtt
caatttcagcgtttttggttgtgggccaagcggcaaaaccatacatatcgtcccaacagg
ccattgagccctcaagaagaagcacaatctgttggacagttaagggaggtatccaacaag
gcacataatgctgaacttaagttgtttttggaagttgagcttggactggatttgcgtcct
cttcctccacccgataagactaaagaggatatactactttttttcaagctttatgaccct
gagaaggaggaacttcgatatgtggggaggctctttgtgaaggcgttaggaaagccatca
gaaatactgacaaaattgaatgaactggctggtttttcacctaatgaagaaattgagctt
tacgaggaaataaagtttgagccaagtgttatgtgtgaacacatagaaaaaaaacttaca
ttccgctcgagccagcttgaggatggtgacatcatctgctaccagaaatctcctgcaata
gatagtgatgaccaatttcgctatcctgatgttccttcttttctagaatatgttcacaat
cgacaggttgtgcattttcggtctttagagaagccaaaggaggatgatttttgtttggaa
ttgtcaaagcttcatacttatgatgatgtcgttgaaagagttgctcaccagcttggtctg
gatgatccatcaaaaattcggcttacatctcataactgttactctcagcagcctaaacct
caacctatcaagtaccggggtgtagagcatctctcagacatgctggttcattacaaccag
acttctgacatattatattatgaagtgttggacatccctctgccagaattgcaaggttta
aaaactcttaaagttgcattccatcatgccacgaaggatgaggttgtaattcatagtatt
agactgccgaaaaacagcacagtggctgatgtgatcaatgacctgaaaacaaaggttgaa
ctgtcccatcctaatgctgaactccggttgctagaggtcttttatcacaagatctacaag
atctttccacctaatgaaaagatagaaaacataaatgatcagtactggacattgcgtgca
gaggagattccggaggaagagaagaaccttggtccccatgatcgcttaattcatgtttat
cacttcatgaaagatccaaatcaaaatcagatgcaggttcagaactttggggagcctttc
tttttggttattcatgaaggtgaaactttagctgaggtgaaagctcggatccagaaaaaa
ctccaggttcttgatgaggagttctctaagtggaagtttgcatttttgtcactgggtcgc
cctgaataccttcaggactcagatattgtgtccagtcgtttccagcgaagagatgtctac
ggagcttgggagcagtaccttggattggagcactcagacactgctccaaaaagggcttac
acagcaaatcagaaccgtcacacatttgagaagccagtgaaaatctacaattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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