KEGG   Phoenix dactylifera (date palm): 103711442
Entry
103711442         CDS       T03274                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103711442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103711442
Spliceosome [BR:pda03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    103711442
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    103711442
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 103711442
NCBI-ProteinID: XP_008795803
UniProt: A0A8B9A442
Position
Unknown
AA seq 392 aa
MANRTDPAAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYMRLTGSVTDVYQYL
EPLYNDYRKLRRKLPDGKFCLTHVDELIDELLTRDYSCDVALPRVQKRWTLEASGILEPR
RSALEEDFEEEEEKEEDEQAMDAYEADTHEKDYYHGRSPTRERDRDRKRDSYRYHRDRDY
DRDYGRGRERDRDRDRERDRDRDRERDRDRDRDRHRARDEKDYGRERERERDRDGRERER
RDRDRGRRRSRSRSRSRDRRERDREDGDYRKRRARGSVSPRRRPEEDGGAREEPRRKKEK
KEKKSDGTDHPDPEIAEANRLRASLGLAPLKL
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggcgaaccggacggatccggcggcgaagagcatccacgggacgaacccgcagaacctg
gtggagaagatcctgcggtcgaagatttaccagaacacctattggaaggagcagtgcttc
ggtctcaccgcggagacgctggtggacaaggccatggagctcgaccatcttggcggcacc
tacggcggcaaccgcaagcccacccccttcatgtgcctcgtcatgaagatgcttcagatc
cagcccgagaaagacatcgtcgtcgagttcatcaagaacgaagactacaagtatgttcga
gttctcggggctttttacatgcgtctcaccgggtcggtcaccgatgtgtatcagtatctg
gagccgctctacaacgattaccgcaagcttcgccggaagctacctgatggaaagttttgc
ttgactcatgtggatgaactcattgacgagctcctcacaagagattactcctgtgatgtt
gctcttccacgggttcagaagaggtggactcttgaagcttctgggatattagaacccaga
agaagtgctttagaagaagattttgaagaggaagaagaaaaagaagaggatgagcaagct
atggatgcctatgaagctgacactcatgaaaaggattattatcatggacgaagtcccact
agggaaagagatagggacagaaagcgggacagctatcgatatcacagggacagagactat
gatcgagactatggaagaggacgcgaaagagatcgagatcgggatagagaacgtgataga
gatagagatagagaaagagatagggacagagatagagaccgccatcgtgctagagatgag
aaagattatggtcgagagagggaacgagaaagggatagggatggtagagagcgggagaga
agagaccgagaccgtggacggcgtaggagtcgttcaaggagcaggagtagagatcgccgt
gaacgagaccgtgaagatggtgattaccgtaagaggcgtgctcgtggcagtgtaagccct
cggaggcggcctgaggaggatggtggtgctcgggaggagcccaggaggaagaaggaaaag
aaagagaaaaagagtgatggaactgatcacccagatccagagattgcagaggctaacaga
cttcgtgcctcgcttggactggcacccctgaagctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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