KEGG   Phoenix dactylifera (date palm): 103717625
Entry
103717625         CDS       T03274                                 
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
  KO
K15450  tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pda03016]
    103717625
Enzymes [BR:pda01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.282  tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
     103717625
Transfer RNA biogenesis [BR:pda03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    103717625
SSDB
Motif
Pfam: TYW3 Met_10 Kelch_1 Kelch_4 Kelch_5 Kelch_6 Kelch_3 Kelch_2
Other DBs
NCBI-GeneID: 103717625
NCBI-ProteinID: XP_038981937
UniProt: A0A8B9A8A3
Position
4:complement(25883571..25897118)
AA seq 1125 aa
MEFEKRKAQALAAMAAPRPDKSPKGTVDAPIVPLLDAINRHPSFFTTSSCSGRISILAHR
TNPPPSSADATAGNPKLEAAAPKKKKKAGGGGWLFVSHDSADPEAIVDLLFGDRRDSEGG
DLVFRFEPLIVAVECRDLASAQSLVSTAISCGFRESGMTSIQKRIMVAIRCSIRLEVPLG
QIGFIMISPEYVRYLVRIANDKMEANRKRTDGFLHVLQSKVLPGPGKEVIDSNKKGLEQI
ADKGFSLDFETKPNVVLSEISIENGTSKSHTEDNILGFIKDRCDSEPAGYSGEDKCAVAS
CKNSLKVSDPLHDKEIGYSHKEIADKDSNIELSGTPKCFLSVVMLKIVGEPIEKLFLWGQ
SACASNNGGQEHILVFGGFGGVGRHERRNCSLVLDPQSGLLSEINSTKPPSPRLGHTASM
VGREIYVIGGRGGPSQILNDVWVLDTTENRWSLLECTGSAFNPRHRHAAAAVGSNIYVFG
GLNNEVIYSCMNVLNTQTLQWSNVSIQGDWPCARHSHSLVASGPQLFMFGGYDGEKALGD
LYSFDVRTLQWRKEETSGRAPSPRFSHSMFIYKNYLGIIGGCPVRQQYQELALLNMHHLV
WMHVTIDSLGGDLWVRSSTCLIGEDLVIVGGGASCYAFGTKFNEPMKIDLHLLESLHNLP
SDKENKSFLQFHDTHGNMNLQQDKHVDGMLDSSDVNLRIDISTNEDGHDVDGEHLVIKLE
KKYAKPVKDILKKFGWLDLTRKVRPSQDGCHIYLPVSRNFYAFYVEEQFNSVNNFDNLEA
FYQLGEFSLKELSVNEVSQSTALNFLLSCGGSLLDDDVVCMRKVHKSPEKMIKESVCSML
RIKRMPLQLLEQLPTRWEHLGDIVVLPKTSFKDPIWDSIGKELWPIVAKALGANRLARQG
RILPTGTRDSTLEILVGDNGWVTHQENGILYTFDATKCMFSSGNLSEKLRMASLDCRDEI
IVDLFAGIGYFVLPFLVKLIIKFLARARAKLVYACEWNPHALKALEHNINANSVADRCVI
LEGDNCVTAPKGVAHRVCLGLLPSSECSWVTAVRALRAEGGMLHVHGNVNDSEEFSWSEY
VVNSIRSIAQSEGLHWAVSVEHVERVKWYGPHIRHLVADVRCKQA
NT seq 3378 nt   +upstreamnt  +downstreamnt
atggagttcgagaaaaggaaggcgcaagccctggccgccatggcggcgccgcggccggac
aagtcccccaagggcacggtggacgcccccatcgtccccctgcttgacgctatcaatcgc
cacccctccttcttcaccaccagctcctgctccggccgcatttcgatcctcgcacaccga
accaacccgcccccttcttccgccgacgcgaccgcgggaaaccctaaactcgaggctgcg
gcgcccaagaagaagaagaaggccggcggaggtggttggcttttcgtctcgcacgactcc
gccgacccggaggccatcgtcgacctcctcttcggcgaccgccgggattccgagggaggg
gatctggtgttccggttcgagcccctcatcgtggccgtcgagtgccgggacctcgcctcg
gcgcagtcgctcgtctctactgctatttcttgcgggtttagagagtccggtatgacaagc
atacaaaaacgtataatggttgccatacgatgttctatacgtttggaggtaccattgggc
caaattggttttattatgatttcaccagagtatgttcggtaccttgttaggattgctaat
gataaaatggaggcaaacagaaagagaacggatggctttcttcatgttttgcaatctaag
gttctcccaggaccaggaaaggaggtgattgattctaataaaaagggtctagaacagatt
gccgataaaggattttcattagattttgaaactaagcctaatgtcgtattgtcggagata
tcaattgagaatggcacttcaaagtctcataccgaagataatatcttgggcttcatcaaa
gatagatgtgattccgaacctgctggatattctggagaagacaaatgcgctgttgcttcc
tgcaagaactcactaaaagtatctgatcctttacatgacaaggaaattggatacagccat
aaagagatagctgacaaagattctaacatagagttgtcaggaacaccaaagtgctttctt
tccgttgtcatgttaaagattgttggcgagccgattgagaagctcttcctctggggtcaa
tcagcttgtgcttcaaacaatggagggcaggaacatatccttgtctttggtggctttgga
ggcgtaggacgacatgaaagaagaaattgctccctggtgcttgatccccagtctggcctg
ttaagtgaaataaattctacaaaacccccatctccacgcttgggtcatacagcctccatg
gtggggagagagatttatgttattggaggaaggggtggtccttctcaaattcttaatgat
gtctgggttctagacaccactgaaaataggtggtcattattagaatgtactggcagtgct
tttaaccctaggcaccgccatgcagctgcagctgtaggctcaaatatatatgtctttgga
ggtcttaataatgaagtgatatattcctgcatgaatgtcttaaacactcaaactcttcag
tggagcaatgttagtatccaaggagattggccctgtgcacgtcattcacattctttggtg
gccagcggccctcagttgtttatgtttggaggttatgatggtgagaaggcactaggcgac
ctctacagttttgatgttagaacattacagtggagaaaagaggagacatctgggagagct
ccttctccaagattctcacattctatgtttatctataaaaattatcttgggatcatcggc
ggttgccctgttaggcaacagtatcaagaattggctttattgaacatgcatcatcttgtc
tggatgcatgtgactattgactctcttggtggagacctttgggttcgcagctcaacctgt
cttattggcgaagatcttgttattgttggtggtggagcatcatgttatgcatttggaaca
aagtttaatgagccaatgaaaattgatttacatttgttagagtctctacacaacctccct
tcagataaggaaaataagtcatttttacagtttcatgacacccatggaaacatgaatcta
caacaggacaagcatgtagatggcatgcttgatagttctgatgtaaatcttaggattgac
atttctaccaatgaagatgggcatgatgtggatggggaacaccttgttataaaacttgaa
aaaaagtatgctaaacctgtgaaggatatattaaaaaaatttggatggttggatcttact
aggaaggttcggccaagtcaggatggatgtcatatttatttaccagttagcagaaatttc
tatgccttctatgtggaagagcaatttaattcagtaaataactttgataatttggaagca
ttttatcaactaggagaattttctttgaaggagctttctgtaaatgaggtttctcaatca
actgcattgaattttttgttgtcatgtggtggttctttactagacgatgatgtagtctgc
atgagaaaggttcacaaatctcctgaaaagatgataaaagaatcagtttgctccatgctg
aggataaaaaggatgcctctgcagctgttggagcagttgcctacaaggtgggaacatctt
ggggatattgttgtgctaccaaagacatcttttaaggatcctatatgggactctataggg
aaggaactttggcctatagttgccaaagcgcttggtgctaatcgtcttgcacggcaaggt
cgaattttgcctactggaacaagagacagcactcttgaaattcttgtgggagacaatggg
tgggttactcatcaagagaatggaatcctttatacatttgatgcaacaaaatgtatgttt
tcctccggaaacctttctgagaagcttcgtatggctagtctagactgtagagatgagatt
attgtggatctatttgctggaattggatactttgtgcttccatttcttgtcaaattgata
ataaaattcttggccagggctagggcaaaactggtttatgcatgtgagtggaatcctcat
gctttaaaggctcttgaacataatatcaatgcaaattctgtggcagatcggtgtgtcata
cttgaaggagataattgtgtcacagcacccaaaggtgtcgcgcatcgtgtttgccttggt
ctcctaccatcaagtgagtgtagttgggttactgctgtgagggctttgagggcggaaggt
ggtatgctgcatgtgcatggaaatgtcaatgactcggaggaattctcatggtcagaatat
gttgttaattccataaggagcattgcacaatctgaaggtttacattgggctgtttcagta
gaacacgtagagcgagtgaagtggtatgggcctcatattcgtcatcttgttgctgatgta
agatgcaagcaagcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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