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Database: PDB
Entry: 1D7R
LinkDB: 1D7R
Original site: 1D7R 
HEADER    LYASE                                   19-OCT-99   1D7R              
TITLE     CRYSTAL STRUCTURE OF THE COMPLEX OF 2,2-DIALKYLGLYCINE DECARBOXYLASE  
TITLE    2 WITH 5PA                                                             
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTEIN (2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE));     
COMPND   3 CHAIN: A;                                                            
COMPND   4 SYNONYM: DGD;                                                        
COMPND   5 EC: 4.1.1.64;                                                        
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CEPACIA;                           
SOURCE   3 ORGANISM_TAXID: 292;                                                 
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: TY103;                                     
SOURCE   7 EXPRESSION_SYSTEM_PLASMID: PKDHE19                                   
KEYWDS    ENZYME COMPLEXES, CATALYTIC MECHANISM, DECARBOXYLATION INHIBITOR,     
KEYWDS   2 LYASE                                                                
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    V.N.MALASHKEVICH,M.D.TONEY,P.STROP,J.KELLER,J.N.JANSONIUS             
REVDAT   5   09-AUG-23 1D7R    1       REMARK LINK                              
REVDAT   4   24-FEB-09 1D7R    1       VERSN                                    
REVDAT   3   01-APR-03 1D7R    1       JRNL                                     
REVDAT   2   27-DEC-00 1D7R    1       REMARK                                   
REVDAT   1   19-NOV-99 1D7R    0                                                
JRNL        AUTH   V.N.MALASHKEVICH,P.STROP,J.W.KELLER,J.N.JANSONIUS,M.D.TONEY  
JRNL        TITL   CRYSTAL STRUCTURES OF DIALKYLGLYCINE DECARBOXYLASE INHIBITOR 
JRNL        TITL 2 COMPLEXES.                                                   
JRNL        REF    J.MOL.BIOL.                   V. 294   193 1999              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   10556038                                                     
JRNL        DOI    10.1006/JMBI.1999.3254                                       
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   M.D.TONEY,J.W.KELLER,R.A.PAUPTIT,J.JAEGER,M.K.WISE,U.SAUDER, 
REMARK   1  AUTH 2 J.N.JANSONIUS                                                
REMARK   1  TITL   CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF 
REMARK   1  TITL 2 DIALKYLGLYCINE DECARBOXYLASE, A DECARBOXYLATING TRANSAMINASE 
REMARK   1  REF    J.MOL.BIOL.                   V. 222   873 1991              
REMARK   1  REFN                   ISSN 0022-2836                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   J.W.KELLER,K.B.BAURICK,G.C.RUTT,M.V.O'MALLEY,N.L.SONAFRANK,  
REMARK   1  AUTH 2 R.A.REYNOLDS,L.O.EBBESSON,F.F.VAJDOS                         
REMARK   1  TITL   PSEUDOMONAS CEPACIA 2,2-DIALKYLGLYCINE DECARBOXYLASE.        
REMARK   1  TITL 2 SEQUENCE AND EXPRESSION IN ESCHERICHIA COLI OF STRUCTURAL    
REMARK   1  TITL 3 AND REPRESSOR GENES                                          
REMARK   1  REF    J.BIOL.CHEM.                  V. 265  5531 1990              
REMARK   1  REFN                   ISSN 0021-9258                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : TNT                                                  
REMARK   3   AUTHORS     : TRONRUD,TEN EYCK,MATTHEWS                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 10.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 96.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 40564                          
REMARK   3                                                                      
REMARK   3  USING DATA ABOVE SIGMA CUTOFF.                                      
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE     (WORKING + TEST SET) : NULL                            
REMARK   3   R VALUE            (WORKING SET) : 0.215                           
REMARK   3   FREE R VALUE                     : NULL                            
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3                                                                      
REMARK   3  USING ALL DATA, NO SIGMA CUTOFF.                                    
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : NULL                   
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE                  (NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : NULL                   
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 3246                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 24                                      
REMARK   3   SOLVENT ATOMS            : 130                                     
REMARK   3                                                                      
REMARK   3  WILSON B VALUE (FROM FCALC, A**2) : 25.830                          
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.    RMS    WEIGHT  COUNT           
REMARK   3   BOND LENGTHS                 (A) : 0.011 ; NULL  ; NULL            
REMARK   3   BOND ANGLES            (DEGREES) : 1.540 ; NULL  ; NULL            
REMARK   3   TORSION ANGLES         (DEGREES) : NULL  ; NULL  ; NULL            
REMARK   3   PSEUDOROTATION ANGLES  (DEGREES) : NULL  ; NULL  ; NULL            
REMARK   3   TRIGONAL CARBON PLANES       (A) : NULL  ; NULL  ; NULL            
REMARK   3   GENERAL PLANES               (A) : NULL  ; NULL  ; NULL            
REMARK   3   ISOTROPIC THERMAL FACTORS (A**2) : NULL  ; NULL  ; NULL            
REMARK   3   NON-BONDED CONTACTS          (A) : NULL  ; NULL  ; NULL            
REMARK   3                                                                      
REMARK   3  INCORRECT CHIRAL-CENTERS (COUNT) : NULL                             
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : FLAT MODEL                                           
REMARK   3   KSOL        : 0.67                                                 
REMARK   3   BSOL        : 155.3                                                
REMARK   3                                                                      
REMARK   3  RESTRAINT LIBRARIES.                                                
REMARK   3   STEREOCHEMISTRY : NULL                                             
REMARK   3   ISOTROPIC THERMAL FACTOR RESTRAINTS : RESTRAINED                   
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1D7R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-99.                  
REMARK 100 THE DEPOSITION ID IS D_1000009869.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 26-JUN-96                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.50                               
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : MPG/DESY, HAMBURG                  
REMARK 200  BEAMLINE                       : BW6                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.1                                
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : IMAGE PLATE                        
REMARK 200  DETECTOR MANUFACTURER          : MARRESEARCH                        
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 42301                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 35.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -3.000                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.6                               
REMARK 200  DATA REDUNDANCY                : 3.900                              
REMARK 200  R MERGE                    (I) : 0.04900                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 9.8000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.05                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 96.4                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 3.80                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.31800                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: 2DKB                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 61.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 4000, 0.15 M SODIUM PYRUVATE,    
REMARK 280  0.03 M MES-KOH, PH 7.50, VAPOR DIFFUSION, HANGING DROP,             
REMARK 280  TEMPERATURE 298K                                                    
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   -X,-Y,Z                                                 
REMARK 290       5555   Y,-X+Y,Z+1/3                                            
REMARK 290       6555   X-Y,X,Z+2/3                                             
REMARK 290       7555   Y,X,-Z+1/3                                              
REMARK 290       8555   X-Y,-Y,-Z                                               
REMARK 290       9555   -X,-X+Y,-Z+2/3                                          
REMARK 290      10555   -Y,-X,-Z+1/3                                            
REMARK 290      11555   -X+Y,Y,-Z                                               
REMARK 290      12555   X,X-Y,-Z+2/3                                            
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       28.74000            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       57.48000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   5  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   5 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       28.74000            
REMARK 290   SMTRY1   6  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       57.48000            
REMARK 290   SMTRY1   7 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   7  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       28.74000            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   9 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   9 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   9  0.000000  0.000000 -1.000000       57.48000            
REMARK 290   SMTRY1  10  0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  10 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  10  0.000000  0.000000 -1.000000       28.74000            
REMARK 290   SMTRY1  11 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2  11  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3  11  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1  12  0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2  12  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3  12  0.000000  0.000000 -1.000000       57.48000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       76.32500            
REMARK 350   BIOMT2   2  0.000000 -1.000000  0.000000      132.19878            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 350   BIOMT2   3  0.866025  0.500000  0.000000        0.00000            
REMARK 350   BIOMT3   3  0.000000  0.000000 -1.000000       28.74000            
REMARK 350   BIOMT1   4  0.500000 -0.866025  0.000000       76.32500            
REMARK 350   BIOMT2   4 -0.866025 -0.500000  0.000000      132.19878            
REMARK 350   BIOMT3   4  0.000000  0.000000 -1.000000       28.74000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ASP A   6      106.74    -44.62                                   
REMARK 500    LYS A  33      122.96   -171.56                                   
REMARK 500    GLN A  52       46.92    -97.75                                   
REMARK 500    ALA A  55       67.35    -65.36                                   
REMARK 500    LYS A  74      -51.90   -123.04                                   
REMARK 500    LEU A 108     -159.22   -117.08                                   
REMARK 500    TYR A 129      -15.75   -146.29                                   
REMARK 500    ALA A 152      177.01    178.73                                   
REMARK 500    ARG A 174       78.28   -118.32                                   
REMARK 500    SER A 271      -74.95   -167.68                                   
REMARK 500    PHE A 300       65.57   -159.02                                   
REMARK 500    ARG A 369       29.02    -70.32                                   
REMARK 500    ARG A 370      -34.73   -140.28                                   
REMARK 500    ALA A 408       80.61   -155.92                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                               K A 436   K                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 LEU A  78   O                                                      
REMARK 620 2 SER A  80   OG   97.4                                              
REMARK 620 3 THR A 303   O   103.6  76.3                                        
REMARK 620 4 VAL A 305   O   152.7  82.2 102.8                                  
REMARK 620 5 ASP A 307   OD1  81.6 169.8  94.0 103.4                            
REMARK 620 6 HOH A 529   O    75.1 103.9 178.6  78.6  85.7                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              NA A 435  NA                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ALA A  95   O                                                      
REMARK 620 2 THR A  98   O    88.8                                              
REMARK 620 3 THR A  98   OG1  72.7  71.3                                        
REMARK 620 4 PRO A  99   O   155.4  69.6  88.6                                  
REMARK 620 5 LEU A 102   O    97.9 146.3  79.3  94.1                            
REMARK 620 N                    1     2     3     4                             
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 435                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 436                   
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5PA A 500                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1D7S   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 1D7U   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 1D7V   RELATED DB: PDB                                   
DBREF  1D7R A    1   433  UNP    P16932   DGDA_BURCE       1    433             
SEQRES   1 A  433  MET SER LEU ASN ASP ASP ALA THR PHE TRP ARG ASN ALA          
SEQRES   2 A  433  ARG GLN HIS LEU VAL ARG TYR GLY GLY THR PHE GLU PRO          
SEQRES   3 A  433  MET ILE ILE GLU ARG ALA LYS GLY SER PHE VAL TYR ASP          
SEQRES   4 A  433  ALA ASP GLY ARG ALA ILE LEU ASP PHE THR SER GLY GLN          
SEQRES   5 A  433  MET SER ALA VAL LEU GLY HIS CYS HIS PRO GLU ILE VAL          
SEQRES   6 A  433  SER VAL ILE GLY GLU TYR ALA GLY LYS LEU ASP HIS LEU          
SEQRES   7 A  433  PHE SER GLY MET LEU SER ARG PRO VAL VAL ASP LEU ALA          
SEQRES   8 A  433  THR ARG LEU ALA ASN ILE THR PRO PRO GLY LEU ASP ARG          
SEQRES   9 A  433  ALA LEU LEU LEU SER THR GLY ALA GLU SER ASN GLU ALA          
SEQRES  10 A  433  ALA ILE ARG MET ALA LYS LEU VAL THR GLY LYS TYR GLU          
SEQRES  11 A  433  ILE VAL GLY PHE ALA GLN SER TRP HIS GLY MET THR GLY          
SEQRES  12 A  433  ALA ALA ALA SER ALA THR TYR SER ALA GLY ARG LYS GLY          
SEQRES  13 A  433  VAL GLY PRO ALA ALA VAL GLY SER PHE ALA ILE PRO ALA          
SEQRES  14 A  433  PRO PHE THR TYR ARG PRO ARG PHE GLU ARG ASN GLY ALA          
SEQRES  15 A  433  TYR ASP TYR LEU ALA GLU LEU ASP TYR ALA PHE ASP LEU          
SEQRES  16 A  433  ILE ASP ARG GLN SER SER GLY ASN LEU ALA ALA PHE ILE          
SEQRES  17 A  433  ALA GLU PRO ILE LEU SER SER GLY GLY ILE ILE GLU LEU          
SEQRES  18 A  433  PRO ASP GLY TYR MET ALA ALA LEU LYS ARG LYS CYS GLU          
SEQRES  19 A  433  ALA ARG GLY MET LEU LEU ILE LEU ASP GLU ALA GLN THR          
SEQRES  20 A  433  GLY VAL GLY ARG THR GLY THR MET PHE ALA CYS GLN ARG          
SEQRES  21 A  433  ASP GLY VAL THR PRO ASP ILE LEU THR LEU SER LYS THR          
SEQRES  22 A  433  LEU GLY ALA GLY LEU PRO LEU ALA ALA ILE VAL THR SER          
SEQRES  23 A  433  ALA ALA ILE GLU GLU ARG ALA HIS GLU LEU GLY TYR LEU          
SEQRES  24 A  433  PHE TYR THR THR HIS VAL SER ASP PRO LEU PRO ALA ALA          
SEQRES  25 A  433  VAL GLY LEU ARG VAL LEU ASP VAL VAL GLN ARG ASP GLY          
SEQRES  26 A  433  LEU VAL ALA ARG ALA ASN VAL MET GLY ASP ARG LEU ARG          
SEQRES  27 A  433  ARG GLY LEU LEU ASP LEU MET GLU ARG PHE ASP CYS ILE          
SEQRES  28 A  433  GLY ASP VAL ARG GLY ARG GLY LEU LEU LEU GLY VAL GLU          
SEQRES  29 A  433  ILE VAL LYS ASP ARG ARG THR LYS GLU PRO ALA ASP GLY          
SEQRES  30 A  433  LEU GLY ALA LYS ILE THR ARG GLU CYS MET ASN LEU GLY          
SEQRES  31 A  433  LEU SER MET ASN ILE VAL GLN LEU PRO GLY MET GLY GLY          
SEQRES  32 A  433  VAL PHE ARG ILE ALA PRO PRO LEU THR VAL SER GLU ASP          
SEQRES  33 A  433  GLU ILE ASP LEU GLY LEU SER LEU LEU GLY GLN ALA ILE          
SEQRES  34 A  433  GLU ARG ALA LEU                                              
HET     NA  A 435       1                                                       
HET      K  A 436       1                                                       
HET    5PA  A 500      22                                                       
HETNAM      NA SODIUM ION                                                       
HETNAM       K POTASSIUM ION                                                    
HETNAM     5PA N-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-Y-          
HETNAM   2 5PA  LMETHYL]-1-AMINO-CYCLOPROPANECARBOXYLIC ACID                    
HETSYN     5PA N-PYRIDOXYL-1-AMINO-CYCLOPROPANECARBOXYLIC ACID-5-               
HETSYN   2 5PA  MONOPHOSPHATE                                                   
FORMUL   2   NA    NA 1+                                                        
FORMUL   3    K    K 1+                                                         
FORMUL   4  5PA    C12 H17 N2 O7 P                                              
FORMUL   5  HOH   *130(H2 O)                                                    
HELIX    1   1 ASP A    6  LEU A   17  1                                  12    
HELIX    2   2 THR A   49  SER A   54  1                                   6    
HELIX    3   3 HIS A   61  GLY A   73  1                                  13    
HELIX    4   4 SER A   84  THR A   98  1                                  15    
HELIX    5   5 THR A  110  GLY A  127  1                                  18    
HELIX    6   6 THR A  142  ALA A  148  1                                   7    
HELIX    7   7 ASP A  184  SER A  200  1                                  17    
HELIX    8   8 GLY A  224  ARG A  236  1                                  13    
HELIX    9   9 PHE A  256  GLY A  262  1                                   7    
HELIX   10  10 SER A  271  ALA A  276  1                                   6    
HELIX   11  11 SER A  286  LEU A  296  1                                  11    
HELIX   12  12 ASP A  307  ASP A  324  1                                  18    
HELIX   13  13 GLY A  325  PHE A  348  1                                  24    
HELIX   14  14 GLY A  377  GLY A  390  1                                  14    
HELIX   15  15 SER A  414  LEU A  433  1                                  20    
SHEET    1   A 4 ILE A  29  LYS A  33  0                                        
SHEET    2   A 4 PHE A  36  ASP A  39 -1  O  PHE A  36   N  LYS A  33           
SHEET    3   A 4 ALA A  44  ASP A  47 -1  N  ILE A  45   O  VAL A  37           
SHEET    4   A 4 LEU A 391  SER A 392  1  N  SER A 392   O  LEU A  46           
SHEET    1   B 7 ARG A 104  LEU A 108  0                                        
SHEET    2   B 7 ALA A 281  THR A 285 -1  O  ALA A 281   N  LEU A 108           
SHEET    3   B 7 ILE A 267  LEU A 270 -1  N  LEU A 268   O  VAL A 284           
SHEET    4   B 7 LEU A 239  ASP A 243  1  O  LEU A 240   N  ILE A 267           
SHEET    5   B 7 LEU A 204  ALA A 209  1  O  ALA A 205   N  LEU A 239           
SHEET    6   B 7 GLU A 130  PHE A 134  1  O  GLU A 130   N  ALA A 205           
SHEET    7   B 7 SER A 164  ILE A 167  1  N  PHE A 165   O  ILE A 131           
SHEET    1   C 2 GLU A 178  ARG A 179  0                                        
SHEET    2   C 2 ALA A 182  TYR A 183 -1  O  ALA A 182   N  ARG A 179           
SHEET    1   D 2 ILE A 212  LEU A 213  0                                        
SHEET    2   D 2 ILE A 219  GLU A 220 -1  O  ILE A 219   N  LEU A 213           
SHEET    1   E 4 ILE A 351  ARG A 357  0                                        
SHEET    2   E 4 LEU A 360  ILE A 365 -1  O  LEU A 360   N  ARG A 357           
SHEET    3   E 4 GLY A 403  ILE A 407 -1  O  GLY A 403   N  ILE A 365           
SHEET    4   E 4 ILE A 395  VAL A 396 -1  O  VAL A 396   N  VAL A 404           
LINK         O   LEU A  78                 K     K A 436     1555   1555  2.65  
LINK         OG  SER A  80                 K     K A 436     1555   1555  2.66  
LINK         O   ALA A  95                NA    NA A 435     1555   1555  2.48  
LINK         O   THR A  98                NA    NA A 435     1555   1555  2.55  
LINK         OG1 THR A  98                NA    NA A 435     1555   1555  2.89  
LINK         O   PRO A  99                NA    NA A 435     1555   1555  2.68  
LINK         O   LEU A 102                NA    NA A 435     1555   1555  2.73  
LINK         O   THR A 303                 K     K A 436     1555   1555  2.87  
LINK         O   VAL A 305                 K     K A 436     1555   1555  2.81  
LINK         OD1 ASP A 307                 K     K A 436     1555   1555  2.54  
LINK         K     K A 436                 O   HOH A 529     1555   1555  2.86  
SITE     1 AC1  4 ALA A  95  THR A  98  PRO A  99  LEU A 102                    
SITE     1 AC2  6 LEU A  78  SER A  80  THR A 303  VAL A 305                    
SITE     2 AC2  6 ASP A 307  HOH A 529                                          
SITE     1 AC3 20 GLN A  52  GLY A 111  ALA A 112  TRP A 138                    
SITE     2 AC3 20 HIS A 139  GLU A 210  SER A 215  ASP A 243                    
SITE     3 AC3 20 ALA A 245  GLN A 246  LYS A 272  TYR A 301                    
SITE     4 AC3 20 THR A 302  THR A 303  ARG A 406  HOH A 504                    
SITE     5 AC3 20 HOH A 511  HOH A 513  HOH A 602  HOH A 605                    
CRYST1  152.650  152.650   86.220  90.00  90.00 120.00 P 64 2 2     12          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.006551  0.003782  0.000000        0.00000                         
SCALE2      0.000000  0.007564  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.011598        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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