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Announcement: The GenomeNet main website is moving from HTTP to HTTPS. On and after June 1, 2018 all traffick to will be automatically forwarded to
   About GenomeNet
   Release notes
   DB release info
Community DBs
Bioinformatics tools

GenomeNet Database Resources

DBGET: Integrated Database Retrieval System
   DBGET search
   LinkDB search     SPARQL endpoint available
KEGG: Kyoto Encyclopedia of Genes and Genomes
   KEGG2 - Table of contents
   KEGG PATHWAY - Systems information: pathways
   KEGG BRITE - Systems information: ontologies
   KEGG Organisms - Organism-specific entry points
   KEGG GENES - Genomic information
   KEGG LIGAND - Chemical information
   KEGG MEDICUS - Health information
KEGG MGENES: Metagenome gene catalogs
KEGG OC - KEGG ortholog clusters
     REST service is available
     SPARQL endpoint available New!
Virus-Host DB: Hosts of sequenced viruses
Taxonomy: Organism classification
Reaction Ontology: Reaction classifications
varDB: Antigenic variation database

GenomeNet Bioinformatics Tools

Sequence Analysis
   BLAST / FASTA - Sequence similarity search
   MOTIF - Sequence motif search
   MAFFT / CLUSTALW / PRRN - Multiple alignment
   TREE - Phylogenetic analysis
Genome Analysis
   ViPTree - The Viral Proteomic Tree Server New!
   KAAS - KEGG automatic annotation server
   MAPLE 2.3 - Functionome evaluator Updated!
    (MAPLE 2.1)
   EGassembler - EST consensus contigs
   GENIES - Gene network prediction
   DINIES - Drug-target network prediction
Chemical Analysis
   SIMCOMP / SUBCOMP - Chemical structure search
     REST service is available
   KCaM - Glycan structure search
   PathComp - Possible reaction path computation
   PathSearch - Similar reaction path search
   PathPred - Reaction pathway prediction
   E-zyme - Enzymatic reaction prediction

Database links

DB growth curve
DB growth curve

Kyoto University Bioinformatics Center