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Database: PDB
Entry: 2VTK
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HEADER    TRANSFERASE                             01-APR-97   2VTK              
TITLE     THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE 1 IN COMPLEX WITH ADP 
TITLE    2 AND DEOXYTHYMIDINE                                                   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: THYMIDINE KINASE;                                          
COMPND   3 CHAIN: A;                                                            
COMPND   4 EC: 2.7.1.21;                                                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HERPES SIMPLEX VIRUS (TYPE 1 / STRAIN F);       
SOURCE   3 ORGANISM_TAXID: 10304;                                               
SOURCE   4 STRAIN: F;                                                           
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: KY 895;                                    
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PGEX2T                                    
KEYWDS    KEY ENZYME IN THYMIDINE SALVAGE PATHWAY, ADDITIONAL THYMIDYLATE       
KEYWDS   2 KINASE ACTIVITY, TARGET FOR ANTI-HERPES VIRAL DRUGS, TRANSFERASE     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    K.WILD,G.E.SCHULZ                                                     
REVDAT   4   21-FEB-24 2VTK    1       REMARK ATOM                              
REVDAT   3   13-JUL-11 2VTK    1       VERSN                                    
REVDAT   2   24-FEB-09 2VTK    1       VERSN                                    
REVDAT   1   22-OCT-97 2VTK    0                                                
JRNL        AUTH   K.WILD,T.BOHNER,G.FOLKERS,G.E.SCHULZ                         
JRNL        TITL   THE STRUCTURES OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS 
JRNL        TITL 2 TYPE 1 IN COMPLEX WITH SUBSTRATES AND A SUBSTRATE ANALOGUE.  
JRNL        REF    PROTEIN SCI.                  V.   6  2097 1997              
JRNL        REFN                   ISSN 0961-8368                               
JRNL        PMID   9336833                                                      
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   K.WILD,T.BOHNER,A.AUBRY,G.FOLKERS,G.E.SCHULZ                 
REMARK   1  TITL   THE THREE-DIMENSIONAL STRUCTURE OF THYMIDINE KINASE FROM     
REMARK   1  TITL 2 HERPES SIMPLEX VIRUS TYPE 1                                  
REMARK   1  REF    FEBS LETT.                    V. 368   289 1995              
REMARK   1  REFN                   ISSN 0014-5793                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   J.FETZER,M.MICHAEL,T.BOHNER,R.HOFBAUER,G.FOLKERS             
REMARK   1  TITL   A FAST METHOD FOR OBTAINING HIGHLY PURE RECOMBINANT HERPES   
REMARK   1  TITL 2 SIMPLEX VIRUS TYPE 1 THYMIDINE KINASE                        
REMARK   1  REF    PROTEIN EXPR.PURIF.           V.   5   432 1994              
REMARK   1  REFN                   ISSN 1046-5928                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.80 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR 3.1                                           
REMARK   3   AUTHORS     : BRUNGER                                              
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 10.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 83.4                           
REMARK   3   NUMBER OF REFLECTIONS             : 11171                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.175                           
REMARK   3   FREE R VALUE                     : 0.238                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 9.800                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1099                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : 0.007                           
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 8                            
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.80                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.92                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 64.60                        
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 918                          
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2510                       
REMARK   3   BIN FREE R VALUE                    : 0.3260                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : 9.50                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 104                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : 0.032                        
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2391                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 44                                      
REMARK   3   SOLVENT ATOMS            : 28                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 33.00                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 32.50                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : 0.27                            
REMARK   3   ESD FROM SIGMAA              (A) : 0.46                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : 4.80                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.009                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.480                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : 22.60                           
REMARK   3   IMPROPER ANGLES        (DEGREES) : 1.680                           
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : NULL                                      
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 5.000 ; NULL                 
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 6.600 ; NULL                 
REMARK   3   SIDE-CHAIN BOND              (A**2) : 8.100 ; NULL                 
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 11.400; NULL                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : PARHCSDX.PRO                                   
REMARK   3  PARAMETER FILE  2  : PARAM19.SOL                                    
REMARK   3  PARAMETER FILE  3  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : TOPHCSDX.PRO                                   
REMARK   3  TOPOLOGY FILE  2   : TOP19.SOL                                      
REMARK   3  TOPOLOGY FILE  3   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2VTK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000178741.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : JAN-96                             
REMARK 200  TEMPERATURE           (KELVIN) : 293                                
REMARK 200  PH                             : 5.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : ROTATING ANODE                     
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : RIGAKU RUH2R                       
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.5418                             
REMARK 200  MONOCHROMATOR                  : GRAPHITE(002)                      
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : AREA DETECTOR                      
REMARK 200  DETECTOR MANUFACTURER          : SIEMENS                            
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : MERGE                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 11472                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.800                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 100.000                            
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 83.1                               
REMARK 200  DATA REDUNDANCY                : 2.300                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : 0.04500                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 18.3000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.89                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 63.7                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : 0.18900                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 3.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: DIFFERENCE FOURIER           
REMARK 200 SOFTWARE USED: X-PLOR 3.1                                            
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 67.00                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 5.5                                   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       3555   -Y,X+1/2,Z+1/4                                          
REMARK 290       4555   Y+1/2,-X,Z+3/4                                          
REMARK 290       5555   X+1/2,Y+1/2,Z+1/2                                       
REMARK 290       6555   -X,-Y,Z                                                 
REMARK 290       7555   -Y+1/2,X,Z+3/4                                          
REMARK 290       8555   Y,-X+1/2,Z+1/4                                          
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       42.05000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000       42.05000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       77.68000            
REMARK 290   SMTRY1   3  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  1.000000  0.000000  0.000000       42.05000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       38.84000            
REMARK 290   SMTRY1   4  0.000000  1.000000  0.000000       42.05000            
REMARK 290   SMTRY2   4 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000  1.000000      116.52000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       42.05000            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       42.05000            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000       77.68000            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   7  0.000000 -1.000000  0.000000       42.05000            
REMARK 290   SMTRY2   7  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY3   7  0.000000  0.000000  1.000000      116.52000            
REMARK 290   SMTRY1   8  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY2   8 -1.000000  0.000000  0.000000       42.05000            
REMARK 290   SMTRY3   8  0.000000  0.000000  1.000000       38.84000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA,PQS                                              
REMARK 350 TOTAL BURIED SURFACE AREA: 5800 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 22580 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -47.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       84.10000            
REMARK 350   BIOMT2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 625  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLN A    34                                                      
REMARK 465     GLN A    35                                                      
REMARK 465     GLU A    36                                                      
REMARK 465     ALA A    37                                                      
REMARK 465     THR A    38                                                      
REMARK 465     GLU A    39                                                      
REMARK 465     VAL A    40                                                      
REMARK 465     ARG A    41                                                      
REMARK 465     PRO A    42                                                      
REMARK 465     GLU A    43                                                      
REMARK 465     GLN A    44                                                      
REMARK 465     LYS A    45                                                      
REMARK 465     SER A   150                                                      
REMARK 465     HIS A   151                                                      
REMARK 465     ALA A   152                                                      
REMARK 465     THR A   265                                                      
REMARK 465     ALA A   266                                                      
REMARK 465     VAL A   267                                                      
REMARK 465     PRO A   268                                                      
REMARK 465     PRO A   269                                                      
REMARK 465     GLN A   270                                                      
REMARK 465     GLY A   271                                                      
REMARK 465     ALA A   272                                                      
REMARK 465     GLU A   273                                                      
REMARK 465     PRO A   274                                                      
REMARK 465     GLN A   275                                                      
REMARK 465     SER A   276                                                      
REMARK 465     ASN A   277                                                      
REMARK 465     ALA A   278                                                      
REMARK 465     GLY A   279                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A  71       32.99    -87.70                                   
REMARK 500    ARG A  75     -146.31     42.62                                   
REMARK 500    VAL A  90      -65.93   -133.75                                   
REMARK 500    ALA A 147       62.37   -102.33                                   
REMARK 500    PRO A 154      103.18    -38.62                                   
REMARK 500    ARG A 163      145.30     83.80                                   
REMARK 500    LEU A 170      -60.17   -135.20                                   
REMARK 500    PRO A 223      104.29    -54.30                                   
REMARK 500    SER A 263       58.57    -63.62                                   
REMARK 500    ASP A 330       66.04    -66.57                                   
REMARK 500    GLN A 331     -175.60   -170.69                                   
REMARK 500    ALA A 375       51.66   -166.62                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 400                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE THM A 500                 
DBREF  2VTK A   34   376  UNP    P03176   KITH_HHV11      34    376             
SEQRES   1 A  343  GLN GLN GLU ALA THR GLU VAL ARG PRO GLU GLN LYS MET          
SEQRES   2 A  343  PRO THR LEU LEU ARG VAL TYR ILE ASP GLY PRO HIS GLY          
SEQRES   3 A  343  MET GLY LYS THR THR THR THR GLN LEU LEU VAL ALA LEU          
SEQRES   4 A  343  GLY SER ARG ASP ASP ILE VAL TYR VAL PRO GLU PRO MET          
SEQRES   5 A  343  THR TYR TRP ARG VAL LEU GLY ALA SER GLU THR ILE ALA          
SEQRES   6 A  343  ASN ILE TYR THR THR GLN HIS ARG LEU ASP GLN GLY GLU          
SEQRES   7 A  343  ILE SER ALA GLY ASP ALA ALA VAL VAL MET THR SER ALA          
SEQRES   8 A  343  GLN ILE THR MET GLY MET PRO TYR ALA VAL THR ASP ALA          
SEQRES   9 A  343  VAL LEU ALA PRO HIS ILE GLY GLY GLU ALA GLY SER SER          
SEQRES  10 A  343  HIS ALA PRO PRO PRO ALA LEU THR LEU ILE PHE ASP ARG          
SEQRES  11 A  343  HIS PRO ILE ALA ALA LEU LEU CYS TYR PRO ALA ALA ARG          
SEQRES  12 A  343  TYR LEU MET GLY SER MET THR PRO GLN ALA VAL LEU ALA          
SEQRES  13 A  343  PHE VAL ALA LEU ILE PRO PRO THR LEU PRO GLY THR ASN          
SEQRES  14 A  343  ILE VAL LEU GLY ALA LEU PRO GLU ASP ARG HIS ILE ASP          
SEQRES  15 A  343  ARG LEU ALA LYS ARG GLN ARG PRO GLY GLU ARG LEU ASP          
SEQRES  16 A  343  LEU ALA MET LEU ALA ALA ILE ARG ARG VAL TYR GLY LEU          
SEQRES  17 A  343  LEU ALA ASN THR VAL ARG TYR LEU GLN CYS GLY GLY SER          
SEQRES  18 A  343  TRP ARG GLU ASP TRP GLY GLN LEU SER GLY THR ALA VAL          
SEQRES  19 A  343  PRO PRO GLN GLY ALA GLU PRO GLN SER ASN ALA GLY PRO          
SEQRES  20 A  343  ARG PRO HIS ILE GLY ASP THR LEU PHE THR LEU PHE ARG          
SEQRES  21 A  343  ALA PRO GLU LEU LEU ALA PRO ASN GLY ASP LEU TYR ASN          
SEQRES  22 A  343  VAL PHE ALA TRP ALA LEU ASP VAL LEU ALA LYS ARG LEU          
SEQRES  23 A  343  ARG SER MET HIS VAL PHE ILE LEU ASP TYR ASP GLN SER          
SEQRES  24 A  343  PRO ALA GLY CYS ARG ASP ALA LEU LEU GLN LEU THR SER          
SEQRES  25 A  343  GLY MET VAL GLN THR HIS VAL THR THR PRO GLY SER ILE          
SEQRES  26 A  343  PRO THR ILE CYS ASP LEU ALA ARG THR PHE ALA ARG GLU          
SEQRES  27 A  343  MET GLY GLU ALA ASN                                          
HET    ADP  A 400      27                                                       
HET    THM  A 500      17                                                       
HETNAM     ADP ADENOSINE-5'-DIPHOSPHATE                                         
HETNAM     THM THYMIDINE                                                        
HETSYN     THM DEOXYTHYMIDINE; 2'-DEOXYTHYMIDINE                                
FORMUL   2  ADP    C10 H15 N5 O10 P2                                            
FORMUL   3  THM    C10 H14 N2 O5                                                
FORMUL   4  HOH   *28(H2 O)                                                     
HELIX    1   1 LYS A   62  LEU A   72  1                                  11    
HELIX    2   2 MET A   85  ARG A   89  1                                   5    
HELIX    3   3 THR A   96  ASP A  108  1                                  13    
HELIX    4   4 ALA A  114  HIS A  142  1                                  29    
HELIX    5   5 PRO A  165  LEU A  169  1                                   5    
HELIX    6   6 CYS A  171  MET A  179  1                                   9    
HELIX    7   7 PRO A  184  LEU A  193  1                                  10    
HELIX    8   8 GLU A  210  LYS A  219  1                                  10    
HELIX    9   9 LEU A  229  GLN A  250  1                                  22    
HELIX   10  10 TRP A  255  LEU A  262  1                                   8    
HELIX   11  11 ILE A  284  ASP A  286  5                                   3    
HELIX   12  12 LEU A  288  PHE A  292  5                                   5    
HELIX   13  13 PRO A  295  LEU A  297  5                                   3    
HELIX   14  14 ASN A  306  ARG A  320  1                                  15    
HELIX   15  15 PRO A  333  GLY A  346  1                                  14    
HELIX   16  16 SER A  357  MET A  372  1                                  16    
SHEET    1   A 4 GLN A 349  HIS A 351  0                                        
SHEET    2   A 4 THR A  48  ILE A  54 -1  N  LEU A  49   O  THR A 350           
SHEET    3   A 4 LEU A 157  ASP A 162  1  N  LEU A 157   O  LEU A  50           
SHEET    4   A 4 ILE A  78  VAL A  81  1  N  VAL A  79   O  THR A 158           
SHEET    1   B 3 VAL A  52  ILE A  54  0                                        
SHEET    2   B 3 ASN A 202  ALA A 207  1  N  ASN A 202   O  TYR A  53           
SHEET    3   B 3 HIS A 323  ASP A 328  1  N  HIS A 323   O  ILE A 203           
SITE     1 AC1 11 GLY A  59  MET A  60  GLY A  61  LYS A  62                    
SITE     2 AC1 11 THR A  63  THR A  64  ARG A 216  ARG A 220                    
SITE     3 AC1 11 ARG A 222  GLN A 331  HOH A 615                               
SITE     1 AC2 10 GLU A  83  ILE A 100  TYR A 101  GLN A 125                    
SITE     2 AC2 10 ALA A 168  ARG A 222  GLU A 225  HOH A 606                    
SITE     3 AC2 10 HOH A 615  HOH A 616                                          
CRYST1   84.100   84.100  155.360  90.00  90.00  90.00 I 41          8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.011891  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.011891  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.006437        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
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