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Database: PDB
Entry: 3PHJ
LinkDB: 3PHJ
Original site: 3PHJ 
HEADER    OXIDOREDUCTASE                          04-NOV-10   3PHJ              
TITLE     SHIKIMATE 5-DEHYDROGENASE (AROE) FROM HELICOBACTER PYLORI IN COMPLEX  
TITLE    2 WITH 3-DEHYDROSHIKIMATE                                              
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: SHIKIMATE DEHYDROGENASE;                                   
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 EC: 1.1.1.25;                                                        
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI;                            
SOURCE   3 ORGANISM_COMMON: CAMPYLOBACTER PYLORI;                               
SOURCE   4 ORGANISM_TAXID: 85962;                                               
SOURCE   5 STRAIN: 26695;                                                       
SOURCE   6 GENE: AROE, HP_1249;                                                 
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE  10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  11 EXPRESSION_SYSTEM_PLASMID: PET28A                                    
KEYWDS    SHIKIMATE DEHYDROGENASE, SHIKIMATE PATHWAY, HELICOBACTER PYLORI,      
KEYWDS   2 OXIDOREDUCTASE, ALPHA/BETA DOMAIN, ROSSMANN FOLD                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    W.C.CHENG,S.C.LIN,C.H.LIN,W.C.WANG                                    
REVDAT   2   01-NOV-23 3PHJ    1       REMARK SEQADV                            
REVDAT   1   09-NOV-11 3PHJ    0                                                
JRNL        AUTH   W.C.CHENG,S.C.LIN,C.H.LIN,W.C.WANG                           
JRNL        TITL   SHIKIMATE 5-DEHYDROGENASE (AROE) FROM HELICOBACTER PYLORI IN 
JRNL        TITL 2 COMPLEX WITH 3-DEHYDROSHIKIMATE                              
JRNL        REF    TO BE PUBLISHED                                              
JRNL        REFN                                                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.30 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.5.0102                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 30.00                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   COMPLETENESS FOR RANGE        (%) : 99.7                           
REMARK   3   NUMBER OF REFLECTIONS             : 21903                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.204                           
REMARK   3   R VALUE            (WORKING SET) : 0.204                           
REMARK   3   FREE R VALUE                     : 0.215                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1182                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.30                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.36                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 1573                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 96.62                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2560                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 84                           
REMARK   3   BIN FREE R VALUE                    : 0.2310                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 4002                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 24                                      
REMARK   3   SOLVENT ATOMS            : 130                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 32.71                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 2.45000                                              
REMARK   3    B22 (A**2) : -1.44000                                             
REMARK   3    B33 (A**2) : -1.16000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : -0.58000                                             
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.423         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.219         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): NULL          
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL          
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.941                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.926                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  4114 ; 0.014 ; 0.022       
REMARK   3   BOND LENGTHS OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  5534 ; 1.470 ; 1.992       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  NULL ;  NULL ;  NULL       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   504 ; 5.974 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   170 ;40.296 ;24.353       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   736 ;18.225 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    12 ;18.726 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   614 ; 0.106 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  3034 ; 0.006 ; 0.021       
REMARK   3   GENERAL PLANES OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  2534 ; 0.847 ; 1.500       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  4036 ; 1.584 ; 2.000       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  1580 ; 2.062 ; 3.000       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  1498 ; 3.472 ; 4.500       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.40                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS                                                           
REMARK   4                                                                      
REMARK   4 3PHJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-NOV-10.                  
REMARK 100 THE DEPOSITION ID IS D_1000062381.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 24-APR-10                          
REMARK 200  TEMPERATURE           (KELVIN) : 110                                
REMARK 200  PH                             : 6.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSRRC                              
REMARK 200  BEAMLINE                       : BL13C1                             
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97622                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 210                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 23057                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.300                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 30.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 1.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 99.9                               
REMARK 200  DATA REDUNDANCY                : 4.100                              
REMARK 200  R MERGE                    (I) : 0.07500                            
REMARK 200  R SYM                      (I) : 0.07500                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 16.1000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.38                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 100.0                              
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.10                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.45700                            
REMARK 200  R SYM FOR SHELL            (I) : 0.45700                            
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.700                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: AMORE                                                 
REMARK 200 STARTING MODEL: PDB ENTRY 3PHG                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 42.68                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 25.5% PEG 8000, 0.1M BIS-TRIS, PH 6.5,   
REMARK 280  VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K                     
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y+1/2,-Z                                             
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000       23.57800            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2                                                    
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     GLN A   115                                                      
REMARK 465     LYS A   116                                                      
REMARK 465     ASN A   117                                                      
REMARK 465     ALA A   182                                                      
REMARK 465     SER A   183                                                      
REMARK 465     LEU A   184                                                      
REMARK 465     HIS A   185                                                      
REMARK 465     ASN A   186                                                      
REMARK 465     HIS A   264                                                      
REMARK 465     HIS A   265                                                      
REMARK 465     HIS A   266                                                      
REMARK 465     HIS A   267                                                      
REMARK 465     HIS A   268                                                      
REMARK 465     HIS A   269                                                      
REMARK 465     GLN B   115                                                      
REMARK 465     LYS B   116                                                      
REMARK 465     ASN B   117                                                      
REMARK 465     ALA B   182                                                      
REMARK 465     SER B   183                                                      
REMARK 465     LEU B   184                                                      
REMARK 465     HIS B   185                                                      
REMARK 465     ASN B   186                                                      
REMARK 465     HIS B   264                                                      
REMARK 465     HIS B   265                                                      
REMARK 465     HIS B   266                                                      
REMARK 465     HIS B   267                                                      
REMARK 465     HIS B   268                                                      
REMARK 465     HIS B   269                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    THR A  65     -167.65   -122.62                                   
REMARK 500    ILE B  50      -55.11     73.39                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHK A 500                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DHK B 500                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3PHG   RELATED DB: PDB                                   
REMARK 900 THE APO FORM OF THE SAME PROTEIN                                     
REMARK 900 RELATED ID: 3PHH   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN COMPLEXED WITH SHIKIMATE                            
REMARK 900 RELATED ID: 3PHI   RELATED DB: PDB                                   
REMARK 900 THE SAME PROTEIN COMPLEXED WITH SHIKIMATE AND NADPH                  
DBREF  3PHJ A    1   263  UNP    P56119   AROE_HELPY       1    263             
DBREF  3PHJ B    1   263  UNP    P56119   AROE_HELPY       1    263             
SEQADV 3PHJ HIS A  264  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS A  265  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS A  266  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS A  267  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS A  268  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS A  269  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS B  264  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS B  265  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS B  266  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS B  267  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS B  268  UNP  P56119              EXPRESSION TAG                 
SEQADV 3PHJ HIS B  269  UNP  P56119              EXPRESSION TAG                 
SEQRES   1 A  269  MET LYS LEU LYS SER PHE GLY VAL PHE GLY ASN PRO ILE          
SEQRES   2 A  269  LYS HIS SER LYS SER PRO LEU ILE HIS ASN ALA CYS PHE          
SEQRES   3 A  269  LEU THR PHE GLN LYS GLU LEU ARG PHE LEU GLY HIS TYR          
SEQRES   4 A  269  HIS PRO ILE LEU LEU PRO LEU GLU SER HIS ILE LYS SER          
SEQRES   5 A  269  GLU PHE LEU HIS LEU GLY LEU SER GLY ALA ASN VAL THR          
SEQRES   6 A  269  LEU PRO PHE LYS GLU ARG ALA PHE GLN VAL CYS ASP LYS          
SEQRES   7 A  269  ILE LYS GLY ILE ALA LEU GLU CYS GLY ALA VAL ASN THR          
SEQRES   8 A  269  LEU VAL LEU GLU ASN ASP GLU LEU VAL GLY TYR ASN THR          
SEQRES   9 A  269  ASP ALA LEU GLY PHE TYR LEU SER LEU LYS GLN LYS ASN          
SEQRES  10 A  269  TYR GLN ASN ALA LEU ILE LEU GLY ALA GLY GLY SER ALA          
SEQRES  11 A  269  LYS ALA LEU ALA CYS GLU LEU LYS LYS GLN GLY LEU GLN          
SEQRES  12 A  269  VAL SER VAL LEU ASN ARG SER SER ARG GLY LEU ASP PHE          
SEQRES  13 A  269  PHE GLN ARG LEU GLY CYS ASP CYS PHE MET GLU PRO PRO          
SEQRES  14 A  269  LYS SER ALA PHE ASP LEU ILE ILE ASN ALA THR SER ALA          
SEQRES  15 A  269  SER LEU HIS ASN GLU LEU PRO LEU ASN LYS GLU VAL LEU          
SEQRES  16 A  269  LYS GLY TYR PHE LYS GLU GLY LYS LEU ALA TYR ASP LEU          
SEQRES  17 A  269  ALA TYR GLY PHE LEU THR PRO PHE LEU SER LEU ALA LYS          
SEQRES  18 A  269  GLU LEU LYS THR PRO PHE GLN ASP GLY LYS ASP MET LEU          
SEQRES  19 A  269  ILE TYR GLN ALA ALA LEU SER PHE GLU LYS PHE SER ALA          
SEQRES  20 A  269  SER GLN ILE PRO TYR SER LYS ALA PHE GLU VAL MET ARG          
SEQRES  21 A  269  SER VAL PHE HIS HIS HIS HIS HIS HIS                          
SEQRES   1 B  269  MET LYS LEU LYS SER PHE GLY VAL PHE GLY ASN PRO ILE          
SEQRES   2 B  269  LYS HIS SER LYS SER PRO LEU ILE HIS ASN ALA CYS PHE          
SEQRES   3 B  269  LEU THR PHE GLN LYS GLU LEU ARG PHE LEU GLY HIS TYR          
SEQRES   4 B  269  HIS PRO ILE LEU LEU PRO LEU GLU SER HIS ILE LYS SER          
SEQRES   5 B  269  GLU PHE LEU HIS LEU GLY LEU SER GLY ALA ASN VAL THR          
SEQRES   6 B  269  LEU PRO PHE LYS GLU ARG ALA PHE GLN VAL CYS ASP LYS          
SEQRES   7 B  269  ILE LYS GLY ILE ALA LEU GLU CYS GLY ALA VAL ASN THR          
SEQRES   8 B  269  LEU VAL LEU GLU ASN ASP GLU LEU VAL GLY TYR ASN THR          
SEQRES   9 B  269  ASP ALA LEU GLY PHE TYR LEU SER LEU LYS GLN LYS ASN          
SEQRES  10 B  269  TYR GLN ASN ALA LEU ILE LEU GLY ALA GLY GLY SER ALA          
SEQRES  11 B  269  LYS ALA LEU ALA CYS GLU LEU LYS LYS GLN GLY LEU GLN          
SEQRES  12 B  269  VAL SER VAL LEU ASN ARG SER SER ARG GLY LEU ASP PHE          
SEQRES  13 B  269  PHE GLN ARG LEU GLY CYS ASP CYS PHE MET GLU PRO PRO          
SEQRES  14 B  269  LYS SER ALA PHE ASP LEU ILE ILE ASN ALA THR SER ALA          
SEQRES  15 B  269  SER LEU HIS ASN GLU LEU PRO LEU ASN LYS GLU VAL LEU          
SEQRES  16 B  269  LYS GLY TYR PHE LYS GLU GLY LYS LEU ALA TYR ASP LEU          
SEQRES  17 B  269  ALA TYR GLY PHE LEU THR PRO PHE LEU SER LEU ALA LYS          
SEQRES  18 B  269  GLU LEU LYS THR PRO PHE GLN ASP GLY LYS ASP MET LEU          
SEQRES  19 B  269  ILE TYR GLN ALA ALA LEU SER PHE GLU LYS PHE SER ALA          
SEQRES  20 B  269  SER GLN ILE PRO TYR SER LYS ALA PHE GLU VAL MET ARG          
SEQRES  21 B  269  SER VAL PHE HIS HIS HIS HIS HIS HIS                          
HET    DHK  A 500      12                                                       
HET    DHK  B 500      12                                                       
HETNAM     DHK 3-DEHYDROSHIKIMATE                                               
FORMUL   3  DHK    2(C7 H10 O5)                                                 
FORMUL   5  HOH   *130(H2 O)                                                    
HELIX    1   1 LYS A   17  PHE A   29  1                                  13    
HELIX    2   2 PHE A   29  ARG A   34  1                                   6    
HELIX    3   3 HIS A   49  LEU A   57  1                                   9    
HELIX    4   4 PHE A   68  CYS A   76  1                                   9    
HELIX    5   5 ILE A   82  GLY A   87  1                                   6    
HELIX    6   6 THR A  104  LEU A  113  1                                  10    
HELIX    7   7 GLY A  127  GLN A  140  1                                  14    
HELIX    8   8 GLY A  153  GLY A  161  1                                   9    
HELIX    9   9 ASN A  191  GLY A  202  1                                  12    
HELIX   10  10 THR A  214  LEU A  223  1                                  10    
HELIX   11  11 GLY A  230  SER A  246  1                                  17    
HELIX   12  12 PRO A  251  PHE A  263  1                                  13    
HELIX   13  13 LYS B   17  PHE B   29  1                                  13    
HELIX   14  14 PHE B   29  ARG B   34  1                                   6    
HELIX   15  15 ILE B   50  LEU B   57  1                                   8    
HELIX   16  16 PHE B   68  CYS B   76  1                                   9    
HELIX   17  17 ILE B   82  GLY B   87  1                                   6    
HELIX   18  18 THR B  104  SER B  112  1                                   9    
HELIX   19  19 GLY B  127  GLN B  140  1                                  14    
HELIX   20  20 GLY B  153  LEU B  160  1                                   8    
HELIX   21  21 ASN B  191  GLY B  202  1                                  12    
HELIX   22  22 THR B  214  LEU B  223  1                                  10    
HELIX   23  23 GLY B  230  SER B  246  1                                  17    
HELIX   24  24 PRO B  251  PHE B  263  1                                  13    
SHEET    1   A 6 LEU A  36  LEU A  43  0                                        
SHEET    2   A 6 LEU A   3  GLY A  10  1  N  LYS A   4   O  LEU A  36           
SHEET    3   A 6 GLY A  61  VAL A  64  1  O  ASN A  63   N  GLY A   7           
SHEET    4   A 6 THR A  91  GLU A  95 -1  O  LEU A  92   N  ALA A  62           
SHEET    5   A 6 GLU A  98  TYR A 102 -1  O  GLU A  98   N  GLU A  95           
SHEET    6   A 6 LYS A  78  ILE A  79  1  N  LYS A  78   O  GLY A 101           
SHEET    1   B 6 ASP A 163  PHE A 165  0                                        
SHEET    2   B 6 GLN A 143  LEU A 147  1  N  VAL A 144   O  ASP A 163           
SHEET    3   B 6 ASN A 120  LEU A 124  1  N  ILE A 123   O  LEU A 147           
SHEET    4   B 6 LEU A 175  ASN A 178  1  O  ILE A 177   N  LEU A 122           
SHEET    5   B 6 LEU A 204  ASP A 207  1  O  TYR A 206   N  ASN A 178           
SHEET    6   B 6 PHE A 227  GLN A 228  1  O  GLN A 228   N  ASP A 207           
SHEET    1   C 6 LEU B  36  LEU B  43  0                                        
SHEET    2   C 6 LEU B   3  GLY B  10  1  N  PHE B   6   O  HIS B  40           
SHEET    3   C 6 LEU B  59  VAL B  64  1  O  SER B  60   N  SER B   5           
SHEET    4   C 6 THR B  91  GLU B  95 -1  O  LEU B  92   N  ALA B  62           
SHEET    5   C 6 GLU B  98  TYR B 102 -1  O  TYR B 102   N  THR B  91           
SHEET    6   C 6 LYS B  78  ILE B  79  1  N  LYS B  78   O  GLY B 101           
SHEET    1   D 6 ASP B 163  PHE B 165  0                                        
SHEET    2   D 6 GLN B 143  LEU B 147  1  N  VAL B 146   O  PHE B 165           
SHEET    3   D 6 ASN B 120  LEU B 124  1  N  ILE B 123   O  SER B 145           
SHEET    4   D 6 LEU B 175  ASN B 178  1  O  LEU B 175   N  LEU B 122           
SHEET    5   D 6 LEU B 204  ASP B 207  1  O  TYR B 206   N  ASN B 178           
SHEET    6   D 6 PHE B 227  GLN B 228  1  O  GLN B 228   N  ASP B 207           
CISPEP   1 ASN A   11    PRO A   12          0         3.33                     
CISPEP   2 LEU A   66    PRO A   67          0         0.77                     
CISPEP   3 ASN B   11    PRO B   12          0         1.50                     
CISPEP   4 LEU B   66    PRO B   67          0        -0.74                     
SITE     1 AC1  8 SER A  16  SER A  18  ASN A  63  LYS A  69                    
SITE     2 AC1  8 ASN A  90  ASP A 105  TYR A 210  GLN A 237                    
SITE     1 AC2  9 SER B  16  SER B  18  ASN B  63  THR B  65                    
SITE     2 AC2  9 LYS B  69  ASN B  90  ASP B 105  TYR B 210                    
SITE     3 AC2  9 GLN B 237                                                     
CRYST1   44.593   47.156  124.124  90.00  97.63  90.00 P 1 21 1      4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.022425  0.000000  0.003004        0.00000                         
SCALE2      0.000000  0.021206  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008128        0.00000                         
(ATOM LINES ARE NOT SHOWN.)
END                                                                             
DBGET integrated database retrieval system