KEGG   Clostridioides difficile 630: CDIF630_01181
Entry
CDIF630_01181     CDS       T03885                                 
Symbol
addA
Name
(GenBank) ATP-dependent nuclease subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
pdc  Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:pdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdc03400]
    CDIF630_01181 (addA)
Enzymes [BR:pdc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDIF630_01181 (addA)
DNA repair and recombination proteins [BR:pdc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     CDIF630_01181 (addA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_12 ResIII DEAD AAA_30 FKS1_dom1
Other DBs
NCBI-ProteinID: AJP10727
UniProt: Q18AN9
Position
1212490..1216317
AA seq 1275 aa
MSSPKWTKEQLEVIESRECNLLVAAAAGSGKTAVLVERIIQMITSRENPIDIDKLLVVTF
TNAAASEMRERIGDAIGKALDENPENKHLQNQLVLLNKSSITTIHSFCLDVIKSNFHRIN
LDPNFRIGDQTECAILKQEAIEEVFEDLYEERDEGFLNLVESYAERGGDKEVQDIILGIY
SFAMASPEPKKWLIDSAERFNIDENFDFSQSIWARAILDTVKIEINGLCLNMERALKEVE
SIEELETFAEKLSVEYKKIADISQACNKSWDEAYKKMASMSFENYVKGVKRISKDAPSYI
KESKEKAKTIRDKTKKSLESIVSATFNKDNDSIREEIKYLYNIVKPISSVVLRFEEEYSN
KKREKGIIDFNDIEHFALNILTDVDEKGNIVPSDIAVGYRNKFYEIFIDEYQDSNLVQEV
LLKAVANTETPNRFMVGDVKQSIYRFRQAKPELFLQKYNNYNDKKGSSHRKIMLYKNFRS
REEVVDAVNYIFENIMNENIGEIEYTEKERLNLGANFNVDTDEKSIIGGATEIHLIQKDN
KLDDDIINDKDDRINNKENEIEEEEKLDNIQLEARMVGNIIKDLMKVNEDGKIQKVYDKG
IDGYRPVEFRDIVILLRATSAWAPVFADELMNMDIPTYADVGVGYFDTIEIKTILSLLQI
IDNPMQDIPLISVLKSPIFGFTPEDLIDIRVQSKDKIFYEVLKSTAEYDGFTDSQNENES
EFIPSEECINKSKDFLIKLKEFKEKSMYMSTDEFIWYLYTRTGYYAYVGALPGGSQRQAN
LKVLFERAKQFEETSLKGIFNFVNFIEKLKKSSSDMGSAKTLGENANVVRIMSIHKSKGL
EFPVVICSAMGKNFNTQDFKKSILYHHNLGYGPQFVDYERRISFPSIAKEALKSKINIEN
LSEEMRVLYVAFTRAKEKLIITGSTRNIQDSIKRWSNGIESLDTISQYEILKGKNFLDWI
MPCVLRHRDLSNLLEEVGLDAVFNVEHNSKWYGKLWNKNDILVEKKSDEEKESIEEILEK
IDVNNPDSDYYGEIEEKLNYIYPYEFSTRKPATISVTEIKKIQNNYEEELINTIFEQKVI
LKKPLFIQNEEEREKISGTERGTIVHLVMEVLDLKNVSSVNDIKSQIRGFVSKGIITEKQ
ASIVNPYKIYKFFASNIGKRMLNAEIINREKSIYAQVNMKDIYIYEKLINNDDKKLYDNE
SVMLRGIVDAYFEEDNQIVLVDYKTDFVNEENINQIIEKYKKQLDLYADIIETLTGKSVK
EKCIYLFGVDEAVCY
NT seq 3828 nt   +upstreamnt  +downstreamnt
gtgagttctcctaaatggacaaaagagcaattagaagttatagaaagtagagaatgcaat
ttattggttgctgctgctgctggttcaggaaaaacagccgttctagttgagcgtataatt
caaatgataacaagtagagaaaatccaattgatatagataagttattagttgttacattt
actaatgctgctgcgtcagaaatgagagagaggataggggatgctataggaaaagcctta
gatgaaaacccagaaaataaacatttacaaaaccaacttgttttattaaataaatctagt
attacaacaatacactcattctgtttggatgttataaaatcaaactttcatagaataaac
ttagaccctaatttcagaataggagaccaaactgaatgtgctattttgaaacaagaagca
atagaggaagtatttgaagatttatatgaagaaagagatgaggggtttttaaatttagtt
gaaagttatgcagaaagaggaggagataaagaagtacaagatattatcttgggaatatat
tcatttgcaatggcttctcctgaacctaaaaaatggttgattgactcagcagaacgattt
aatattgatgaaaattttgatttttcacagtctatttgggctagagctatattagacact
gtaaaaatagagattaatggtctttgtctaaatatggaaagggcattaaaagaagtggaa
tcaatagaagaattagaaacttttgcagaaaagttatccgttgaatataaaaaaattgct
gacatttcacaagcatgtaataaatcttgggatgaggcatataaaaagatggcaagtatg
tcctttgaaaattatgtaaaaggagtaaaaagaatttcaaaagatgctccttcgtatata
aaagaatcaaaagaaaaggcaaaaactataagagataagactaagaagtctttagaaagt
atagtaagtgctacattcaataaagataatgattctattagagaagaaataaaatatctt
tataacatagttaaaccaatatctagtgttgtactgagatttgaagaggaatatagcaat
aagaaaagagaaaaaggaataatagattttaacgatatagagcattttgcattaaatata
cttacagatgtagatgaaaaaggtaatattgtaccttctgatatagcagttggatataga
aacaagttttatgaaatatttatagatgaatatcaggatagtaatctagtgcaggaagta
ctgcttaaagctgttgcaaatacagaaactccaaatagatttatggttggtgatgtaaaa
cagagtatatatagatttagacaagcaaagccagaattatttttgcaaaaatataataac
tataatgataaaaagggaagctcccatagaaaaataatgctttacaaaaactttagaagt
agagaagaagttgtagatgctgtaaattatatatttgaaaatataatgaatgagaatata
ggagaaattgaatatacagaaaaagaaagactaaatttaggtgcaaattttaatgtggat
acagacgagaaatctattattggtggagcaacggagatacacctaatacaaaaagataat
aaacttgatgatgatattataaatgataaagacgatagaattaataacaaagaaaatgaa
atagaggaagaagaaaaattagataatatacaacttgaggctagaatggttggaaacatt
atcaaagatttaatgaaagtcaatgaagatggaaaaattcaaaaggtctatgataaggga
atagatggatatagacctgtggaatttagagatatagttattcttttaagagctacatct
gcatgggctccagtgtttgcagatgaattgatgaatatggatataccaacgtatgctgat
gttggagtggggtattttgatacgattgaaataaaaacaatattgtcattacttcaaata
atagataatccaatgcaagatatacctcttatatctgtattaaaatcacctatatttgga
tttacaccagaggatttgattgatattagagttcagagtaaagataaaattttttatgag
gttttaaaaagtacagcagagtatgatggatttacagattctcaaaatgaaaatgagtct
gagtttataccaagtgaagaatgcataaacaaaagtaaagattttttaattaagctaaag
gaatttaaagaaaagtcaatgtacatgagtacagatgaatttatatggtacttgtacaca
aggactggatactatgcctatgttggagcattgccaggtggaagtcaaagacaagctaat
ttaaaagtattgtttgagagagcaaaacaatttgaagaaaccagtcttaaaggaatattc
aactttgtaaattttatagagaaattaaaaaaatctagttctgatatgggaagtgcaaaa
acacttggtgagaatgcaaatgttgttagaataatgagtattcataaaagtaaaggtcta
gaatttccagtagtcatatgctctgcaatgggtaaaaatttcaatactcaagattttaaa
aagagtattttatatcatcataatttagggtatggacctcaatttgtagactatgagaga
aggatttcttttccaagtatagccaaagaagcattaaaaagcaaaataaatatagaaaat
ttatcagaagagatgagagttttatatgttgcatttacaagagctaaagaaaaattgatt
ataactggttctactagaaatatacaagatagtataaagagatggtcaaatggaattgaa
agtttagatacaatatcacaatacgagatattaaaaggtaaaaattttttagattggata
atgccttgtgtattaagacatagggatttatctaatctactagaagaagtaggattagac
gcagtttttaatgttgaacataattcaaaatggtatggaaagttgtggaataagaatgat
attttagtggaaaagaagagtgatgaagaaaaagaaagtattgaagaaattcttgaaaaa
atagatgtaaataatcctgacagtgattattacggtgaaatagaagaaaaattaaactat
atatatccatatgaatttagtacaagaaaacctgctactatatctgttacagaaataaaa
aagatacaaaataattatgaagaagagttaataaatactatatttgaacaaaaagtaata
ttaaaaaagcctctatttattcaaaatgaagaagaaagagaaaaaataagtggaacagaa
agaggtacaatagtccatttagttatggaggttttagacttaaaaaatgtaagtagtgta
aatgatataaaatcacaaataagaggttttgtttcaaaaggtataataacagaaaaacaa
gctagtatagtaaatccatataaaatatataaattttttgcctctaacataggaaaaaga
atgttgaatgctgaaattataaatagagaaaaatccatttatgcacaagtaaatatgaaa
gacatatatatttatgaaaagcttataaacaatgatgataaaaaactttatgataatgaa
agtgtcatgttaagaggtatagttgatgcttattttgaagaagataatcaaatagttttg
gtggattataaaacagattttgtaaatgaggaaaatataaatcaaataatagagaaatat
aaaaaacagttggatttatatgcagatattattgaaactttaactggtaagtcagtaaaa
gagaaatgtatatatttatttggagttgatgaagctgtttgttattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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