KEGG   Prevotella denticola: HMPREF9137_0639
Entry
HMPREF9137_0639   CDS       T01459                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pdn  Prevotella denticola
Pathway
pdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    HMPREF9137_0639 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdn03400]
    HMPREF9137_0639 (ruvB)
Enzymes [BR:pdn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HMPREF9137_0639 (ruvB)
DNA repair and recombination proteins [BR:pdn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     HMPREF9137_0639 (ruvB)
    RecFOR pathway proteins
     HMPREF9137_0639 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 AAA_3 Mg_chelatase AAA_16 nSTAND3 TIP49 AAA_14 TsaE NB-ARC RNA_helicase AAA_18 AAA_17 NTPase_1 Rad17 AAA_33 AAA_28 Sigma54_activ_2
Other DBs
NCBI-ProteinID: AEA21629
Position
complement(752611..753645)
AA seq 344 aa
MPEDFDIHEEKLTSAEKDFENALRPLRFSDFSGQQKVVENLSVFVEAAKYRGEPLDHTLL
HGPPGLGKTTLSNIIANELGVGFKITSGPVLDKPGDLAGILTSLEPNDVLFIDEIHRLSP
VVEEYLYSAMEDYRIDIMIDKGPSARSIQIDLNPFTLVGATTRSGLLTAPLRARFGINLH
LEYYDPETLKRIIKRSAQLLKVPIVDDAAIEIARRSRGTPRICNSLLRRVRDFAQVKGNG
TITLEIASLSLQSLNIDKYGLDEIDNKILLTIIDKFRGGPVGVSTIATAIGEDSGTVEEV
YEPFLIMEGFIKRTPRGRVATQLAYSHLGRNYARADSLQPDLFD
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgccagaagatttcgatatacacgaggaaaaactgacctcggccgagaaggatttcgag
aatgccctccgcccgctgcgcttcagcgacttcagcggacagcagaaggtcgtcgagaac
ctcagtgtctttgtcgaggctgccaaataccgtggcgaaccgctcgaccatacactcctg
cacggtccgccgggactgggcaagacgacgctgagcaacatcatcgccaacgaactgggc
gtaggtttcaaaataacatcggggcccgtgctcgacaaaccgggcgatctggcgggcatc
ctcacgtctcttgaaccgaacgacgtgctcttcatcgacgagatccaccggctctctcct
gtcgtagaagagtacctctactccgccatggaagactaccgcatcgacatcatgatcgac
aaggggccttcggcacggtccatccagatcgacctcaatccgttcaccctcgtcggcgca
accacacgcagcggactgctcacggctccgctccgtgcccgtttcggcatcaacctccat
ctggaatactacgatccggagaccctgaaacgcatcatcaaacggtcggcacaactgttg
aaagtgcctatcgtggacgatgccgccatcgaaatcgcacgccgctcgcgcggcacgcca
cgtatctgcaattctctgctccgccgtgtgcgcgacttcgcacaggtaaagggcaacggc
accatcaccctcgaaatcgccagcctctcactgcagtcgctgaacatcgacaagtacgga
ctggacgaaatcgacaacaagattctccttaccatcatcgataagttccggggcggcccg
gtgggcgtgtcgaccattgcgacagccatcggcgaggattccggaacggtagaagaggtc
tacgagcctttcctcatcatggaaggattcatcaagcggacaccccgggggcgcgtagca
acccagcttgcatacagccatctcgggaggaactatgcccgggccgactcccttcagccg
gacctgttcgattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (22)   
   Pfam (22)   
All databases (31)   

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