KEGG   Penicillium digitatum: PDIP_32590
Entry
PDIP_32590        CDS       T04849                                 
Name
(RefSeq) DNA-directed RNA polymerase
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
pdp  Penicillium digitatum
Pathway
pdp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PDIP_32590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdp03021]
    PDIP_32590
Enzymes [BR:pdp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PDIP_32590
Transcription machinery [BR:pdp03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     PDIP_32590
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 DUF321
Other DBs
NCBI-GeneID: 26231579
NCBI-ProteinID: XP_014535863
UniProt: K9G6V4
Position
Unknown
AA seq 1268 aa
MAPAATETQWSVEYDTLRRENLFKNPPTDHTAYPSLAESIRPHIDSFNALFDDSKILEAG
LKDIGIKTFLDGELETYEQKKARQAEGIRPPKRNRLNVRVREIFLDKPTLPPANKYATRN
REIYPSECRERHSTYRGKLRARLEYQVNNGDWMESVRELGNVPIMVRTNRCHLEKATPDE
LVRHNEESEELGGFYIVNGNEKLIRMLVVGKRNYPMSIIRGSFVKRGQTYTKFGVQIRSV
RPDQTSQTNVLHYLSDGNVTFRFSWRKNEYLIPVMMILKALAETNDREIFEAIVGGASSK
GMKNTFVTDRVELLLRTYHAYQKHSQYDCRSHLGKAFRPVLGVPADMPDEEVGTEFLRKV
VLPHLGNENVTEAQDWDKFKLITFMIRKLYSTVAGDCAPDNPDAVSNQEILLGGFLYGMI
LKERIEEWLRSFGPIARDWSIRNNGAKFTDEAFERDFLSKIVKRSNENIGNALEYFLSTG
NLVSPTGLDLQQTSGYTVIAEKINFYRFISHFRMIHRGSFFAQLKTTTVRKLLPESWGFL
CPVHTPDGSPCGLLNHLAHKCFISTDNLDVSQLPRTLVQLGVRSESSVALDESVVVQLDG
RIIGYCSPKQAQRIADTIRYWKVEGKNNIPRELEIGYIPNSSGGQYPGVYMFSQSARMYR
PVKYLALDKLDYVGPFEQPFMEIACVESDLIPGLSTHIEFTPTNILSIVANMTPFSDYNQ
SPRNMYQCQMSKQTMGTPGTSIAHRTDNKLYRIQTGQTPIVRPPLYNAYGLDNFPNGMNA
VVAIISYTGYDMDDAMIINKSAHERGFGHGTVYKTKVVTLADNDSRRTKSKREVTKLFGF
APGDEVKEQVRNIIDEDGMPHLGARVKEGDKIAAWHNVRFDPASDSYVNVDGVTHYMKYK
DAEEGYVDSIRLMGSESGNEPAQSLSIKYRIPRKPVIGDKFSSRHGQKGVLSQLWPAVDM
PFSESGMQPDLIINPHAFPSRKAPLLLRSKKTHSSNAFPGMTIAQMIESMAGKAGAMHGL
PQDSTPFQFSEENTATDYFGEQLRKAGYNYYGNEPLYSGITGREFSADIYMGLVYYQRLR
HMVNDKFQVRTTGPVNALTGQPVKGRAKGGGIRVGEMERDSLIAHGAAFLLQDRLMNCSD
AQHTWICRSCGSFLSTQVAVSGSSRSRTAINPGAAAAAAKAAPNQQSTNAHAGSAIGALG
GVNGVVRCRRCAREATFDDSRAEVWEDGDGHRYVGGDNVTIVAVPGVLRYLDVELAAMGI
RMKFLVEN
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggcgcccgcagccacagaaacgcagtggtcagtcgaatacgacactctacgacgggag
aacctgttcaagaatcctccgacggatcacacagcttatccatcgttggccgagtcgatt
cgaccgcatattgattctttcaatgctctcttcgacgacagcaagatcctagaggcaggt
ttgaaggatatcggtatcaagaccttcctagatggtgaactcgaaacgtatgagcagaag
aaggcacgccaagcagaaggcattcgcccaccgaagcggaatcgcttaaacgtccgcgtg
cgtgaaatcttcctcgacaagcctaccctgcctcccgccaacaaatacgccacccgaaac
cgtgaaatctacccttcagaatgcagagagcgccattcgacgtaccgtggaaagctccgt
gctcgtctcgagtaccaggtcaacaatggagactggatggagtctgtccgcgagctgggt
aatgtcccgattatggtacgcaccaaccggtgtcaccttgaaaaggctactcccgatgaa
cttgttcgacacaacgaagaatcggaggaactaggtggtttctacatcgtcaacggtaac
gagaagctcattcgtatgctggtcgtcggcaagcgcaactaccccatgtccatcattcgt
ggttctttcgtcaagcgtggtcagacctacacaaagttcggtgttcaaatacgatcggtt
cgtcccgatcagacttcgcagaccaacgtgcttcactacctttccgatggaaacgtcacc
ttccgtttctcatggcgcaagaatgaataccttattcccgtgatgatgatcctcaaggca
cttgccgagaccaacgaccgcgaaatatttgaggccattgtcggtggtgcttcctccaag
ggcatgaagaacactttcgtcacggatcgtgtcgagcttttgctgcgaacctaccatgcc
taccagaagcacagccagtatgattgccggtcccacctcggcaaggctttccgacctgta
ctcggagtccctgctgacatgcctgacgaggaagttggcacagagttcctccgcaaggtt
gttctcccccatcttggaaatgagaatgtcactgaggctcaagactgggacaaattcaag
ttgattactttcatgatccgcaagctttactctacagttgcaggagactgtgctcctgac
aatcctgatgccgtctccaatcaggaaattctgcttggtggcttcctttacggaatgatt
ctgaaggaacgtatcgaggagtggctccgttcattcggccccattgctagagattggtcc
atccgcaacaacggcgcaaagttcaccgatgaagcgtttgagcgagacttcctttccaag
atcgtcaagcgatcaaacgagaacattggtaatgcacttgagtacttcctctctactggt
aacttggtcagtcctactggtctcgatttgcaacaaacctccggttacaccgtcattgca
gagaagatcaacttttaccgtttcatcagtcacttccgaatgattcaccgaggtagtttc
ttcgctcagttgaagactaccaccgtccgtaagctgctaccagaaagttggggtttcctt
tgcccggttcacactcctgatggatcgccttgtggtctgctcaaccatttggcgcacaag
tgtttcatctcgacggacaacctggatgtatctcaactgcctcggactctggttcagctc
ggtgtccggtctgagtcttccgtggctctggatgagagcgtggtcgtccagttagatggc
cgaatcattggttactgctcgcctaagcaggcccagaggatcgccgataccatccggtac
tggaaggtcgaaggcaaaaacaacattcctcgtgaattggaaattggatatattcccaac
tcaagcggcggtcaatacccaggtgtctacatgttctcccaatcagcgagaatgtaccgc
cctgttaagtacctcgcgctggataagctggattatgttggaccgttcgagcaacccttc
atggaaattgcctgtgtggagtctgacctgatccccggtctttcgacccacatcgagttt
acgcccacgaacatcctctctatcgtcgcaaacatgacccccttctccgactacaaccaa
tctccacgtaacatgtaccagtgtcaaatgagcaaacaaaccatgggtacaccaggcacc
tcgattgcccaccgtaccgacaacaagttgtaccgcatccaaacgggtcaaacgccaatt
gtacggccacctctctacaacgcctacggtctggacaatttccccaacggaatgaacgca
gttgtagctattatctcctacaccggatacgatatggacgatgctatgattatcaacaag
tccgcacacgaacgtggcttcggccacggtacagtctacaagaccaaggtcgtcacttta
gccgacaacgattcccgccgaaccaagtccaagcgtgaggtcaccaagctgtttggattc
gcccccggcgacgaggtcaaagagcaggtgcgcaacatcatcgacgaggacggaatgccg
cacctaggtgctcgcgttaaggaaggtgacaagatcgcggcctggcacaacgtccgcttc
gatcccgcgtctgactcgtacgtcaacgtcgacggagtcacccactacatgaaatacaag
gatgccgaagaaggttacgtcgacagcatccgtctcatgggttccgagtctggcaacgag
cctgctcaatcgctcagcatcaaataccgcattccccgaaagcccgtcattggtgacaag
ttctcttctcgtcacggtcagaagggtgtcttgtctcaactctggcctgcggtcgacatg
cccttctctgagagcggcatgcagcccgatctgattattaaccctcacgctttcccgtcc
cgtaaggccccgttactcctaagatcaaaaaaaactcactcgtctaacgcattcccaggt
atgacaatcgctcaaatgattgagtccatggccggcaaagccggtgccatgcacggtctt
ccgcaagactccactcccttccaattctccgaagaaaacaccgcaaccgactacttcggc
gagcagctccgcaaagccggctacaattactacggtaacgagccgttgtacagtggtatc
acgggtcgcgagttctccgccgacatctacatgggtttggtatactaccagcgtctgcgt
cacatggtgaacgacaagttccaagtgcgtaccactggtcccgtcaacgcgctcacgggc
cagcccgtgaagggtcgtgcgaagggtggtggtattcgtgtcggagagatggagcgtgat
tcgctcattgctcacggtgcggctttcttgctgcaggatcgtctcatgaactgctccgac
gcccagcacacttggatttgtcgcagctgtggttcattcttatccactcaggttgctgtt
tctggctcctcccgctctcgcaccgctattaaccccggtgcagccgcggctgctgccaag
gctgctcctaatcagcagagcactaatgctcatgctggttctgctattggtgctttgggt
ggtgtcaatggtgttgtgcgttgccgtcgctgtgcccgcgaggctacctttgatgactcc
cgcgctgaagtctgggaagatggcgatggacaccgctacgttggtggtgacaatgttacg
atcgttgctgtgcctggtgtcctacggtacttggatgttgagttggcggccatgggtatc
aggatgaagttcctggtggagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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