KEGG   Penicillium digitatum: PDIP_81630
Entry
PDIP_81630        CDS       T04849                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
pdp  Penicillium digitatum
Pathway
pdp03013  Nucleocytoplasmic transport
pdp03015  mRNA surveillance pathway
pdp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PDIP_81630
  09122 Translation
   03013 Nucleocytoplasmic transport
    PDIP_81630
   03015 mRNA surveillance pathway
    PDIP_81630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdp03019]
    PDIP_81630
   03041 Spliceosome [BR:pdp03041]
    PDIP_81630
Messenger RNA biogenesis [BR:pdp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PDIP_81630
    TREX complex
     PDIP_81630
Spliceosome [BR:pdp03041]
 Complex C
  Other components
   EJC/TREX
    PDIP_81630
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PDIP_81630
SSDB
Motif
Pfam: RRM_1 RRM_occluded FoP_duplication RRM_7
Other DBs
NCBI-GeneID: 26236479
NCBI-ProteinID: XP_014532320
UniProt: K9FSI0
Position
Unknown
AA seq 252 aa
MSANLDKSLDDLVGSRRQTARHTARRRGGSRRAATKPSAVGGVKKSTKAAPKAAHPAPVA
QTGSSKILVSGLPSDVSEANVKEYFNKSAGPVRRVMLTYNQNGTSRGIASIQFNRADTAA
KATKELNGLLVDGRPMKIEVVYDASHVPTVPASKPLTERVAQKAQPKSAATPKTKENKNA
ATDKGSRRGKGPARPRGRNAGRGKPKTVEELDAEMIDYFNTDVPPAEGTAPVSGTVSAAN
ASQDIGMADEIS
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtctgccaaccttgataagtcccttgatgatcttgtcggcagccgtcgtcagactgct
cgccacactgctcgccgtcgtggtggatcccgccgcgctgcgaccaagccatccgccgtt
ggaggtgtgaagaaatccaccaaggctgctcccaaggctgctcacccagcccctgtcgcc
cagactggttctagcaagattcttgtcagcggattgccttccgatgtgtccgaggccaat
gtcaaggaatacttcaacaagtctgctggccccgtgagacgggtcatgctcacctacaac
cagaatggtactagccgtggcatcgcctccatccagttcaacagggcagacaccgctgcc
aaagccaccaaggagctcaacggactcctcgtcgatggccgccccatgaagatcgaagtt
gtctatgatgcgtctcacgttcctacagtccctgcttctaagcctctcactgagcgcgtt
gctcagaaggctcagcccaagtccgccgctacccccaagaccaaggaaaacaagaacgcc
gctactgacaagggaagccgccgcggaaagggccctgctcgcccccgtggccgcaacgct
ggccgtggaaagcccaagactgttgaggagctggatgctgagatgattgactacttcaac
actgatgtccccccagctgaaggcactgctcctgtcagtggcactgtctctgcggccaac
gccagtcaggacatcggcatggccgacgagatttcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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