KEGG   Pseudomonas sp. ATCC 13867: H681_03365
Entry
H681_03365        CDS       T02524                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
pdr  Pseudomonas sp. ATCC 13867
Pathway
pdr03030  DNA replication
pdr03430  Mismatch repair
pdr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H681_03365 (holA)
   03430 Mismatch repair
    H681_03365 (holA)
   03440 Homologous recombination
    H681_03365 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdr03032]
    H681_03365 (holA)
   03400 DNA repair and recombination proteins [BR:pdr03400]
    H681_03365 (holA)
Enzymes [BR:pdr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     H681_03365 (holA)
DNA replication proteins [BR:pdr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     H681_03365 (holA)
DNA repair and recombination proteins [BR:pdr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     H681_03365 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: AGI22555
UniProt: M4XB34
Position
complement(726352..727389)
AA seq 345 aa
MKLNPGQLAKHLQGNLAPVYVVSGDEPLLCQEACDAIRTACRQHDFGERQVFNAEANFDW
GQLLEAGASLSLFAEKRLIELRLPSGKPGDKGAAILQEYLQRPPEDTVLLVSLPKLDGST
QKTKWAKALIDGNAAQFIQIWPIDAHQLPQWIRQRLSQAGLAASQEAVDLIAARVEGNLL
AAAQEIEKLKLLADGQQIDAATVQAAVADSARFDVFGLIDAALNGEAAHCLRMLEGLRGE
GVEPPVILWALAREIRVLAALAQQFSQGVPLEKAFSQARPPIWDKRRPLMTKALQRHTAP
RWNQMLQDAQLIDAQIKGQAPGTPWSGLARLALLVAGQRISLPSA
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgaagctcaatcccggacaactcgccaagcacctgcaaggcaacctcgcccccgtctac
gtcgtcagcggcgacgagccgctgctctgccaggaagcctgcgacgccattcgcacggcc
tgccgccagcatgatttcggcgagcgccaggtgttcaacgccgaagccaacttcgactgg
ggccaactgctcgaagccggcgccagcctctcgctgttcgccgaaaagcgcctgatcgaa
ctgcgcctgccgtctggcaagcccggcgacaagggcgctgccatcctccaggaatacctg
cagcgcccgccggaggacaccgtcctgctggtcagcctgcccaagctcgacggcagcacg
cagaagacaaaatgggccaaggccctgatcgacgggaatgctgcacagttcatccagatc
tggcccatcgatgcgcaccagttgccgcaatggattcgccagcgcctgtcccaggccggc
ctcgccgccagccaggaagccgtggacctgatcgccgcacgtgtggaaggcaacctcctg
gccgccgcccaggaaatcgaaaagctcaagctgctggccgacggtcagcagatcgacgcc
gccaccgtccaggcagcggtagccgacagcgcgcgcttcgacgtcttcggcctgatcgat
gccgccctgaacggcgaagctgctcactgcctgcgcatgctcgaaggtctgcgcggcgaa
ggtgtggagccgccggtgatcctctgggcgctggcccgggaaatccgcgtgctggcggcc
ctggcccagcagttcagccagggtgtgccgctggaaaaagccttcagccaggcccgcccc
cccatctgggacaagcgccgcccgctgatgaccaaagccctgcaacggcataccgcgccg
cgctggaaccagatgctgcaggacgcccaactgatcgatgcacagatcaaggggcaagcg
ccgggcaccccctggagcggcctcgcccgcctcgccctgctggtggccggacagcgcatc
agcctgccgtcggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system