KEGG   Pseudomonas sp. ATCC 13867: H681_23975
Entry
H681_23975        CDS       T02524                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pdr  Pseudomonas sp. ATCC 13867
Pathway
pdr00300  Lysine biosynthesis
pdr00470  D-Amino acid metabolism
pdr01100  Metabolic pathways
pdr01110  Biosynthesis of secondary metabolites
pdr01120  Microbial metabolism in diverse environments
pdr01230  Biosynthesis of amino acids
Module
pdr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pdr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    H681_23975
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    H681_23975
Enzymes [BR:pdr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     H681_23975
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AGI26662
UniProt: M4X6G9
Position
5372824..5374071
AA seq 415 aa
MDAFTVRDGQLFAEDVPLSAIAERFGTPTYVYSRAHLTQQYRAYADALAGVEHRVCFAVK
ANSNLAVLNVLARLGAGFDIVSRGELERVLAAGGDPANVVFSGVGKTREDMRRALQVGVH
CFNVESDVELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYIATGLKENKFGIAIDAAEA
VYARAAQLPNLDVIGVDCHIGSQLTSLEPFLDALDRLLALVDRLAARGIAIRHLDLGGGL
GVRYRDETPPAPAEYIRALRERLGNRPLALVFEPGRNIAANAGVLLTRVEYLKHTPDKDF
AIVDAAMNDLIRPALYQAWMDVTPVVARDGEARAYDLVGPICETGDFLAKDRSLVLEEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGSAAHEVRRRETIQELFAGESLLPD
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggacgccttcaccgtccgcgacgggcaactgttcgcggaggacgtgccgctgtcggca
atcgccgagcgcttcggcacgccgacctacgtctactcccgcgcgcacctgacgcagcaa
taccgcgcctacgctgatgccctggcgggcgtcgagcatcgggtttgcttcgcggtaaaa
gccaattccaacctcgccgtgctgaacgtgctggcgcgcctgggcgcaggtttcgacatc
gtctcccgtggcgaactggagcgcgtgctggccgccggcggcgatccggcgaacgtggtg
ttctccggcgtcggcaagacccgcgaggacatgcgccgcgccctgcaggtcggcgtgcac
tgcttcaacgtcgaatccgacgtcgagctcgagcgcctgcagcgggtcgccgccgagctg
ggcgtgaaggcaccggtgtccctgcgggtgaacccggacgtcgacgcgcagacccacccg
tacatcgccacgggcctgaaggaaaacaagttcggcatcgccatcgacgccgccgaggcg
gtctacgcccgcgccgcgcagctgccgaacctggacgtgatcggcgtcgattgccacatc
ggctcgcagctgaccagcctggaacccttcctcgacgccctcgaccgcctgctggcgctg
gtggatcgcctcgccgcgcgcggcatcgccatccgccacctggacctgggcggcggcctc
ggcgtgcgctaccgcgatgaaacgccgcctgcgcctgccgagtacatccgcgccctgcgc
gagcgcctgggcaaccgcccgctggcgctggtgttcgagccgggccgcaacatcgccgcc
aacgccggcgtgctgctgacccgcgtcgagtacctgaaacacaccccagacaaagacttc
gccatcgtcgatgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
gatgtcacgccggtcgtcgcccgcgatggcgaagcgcgcgcctacgacctggtcgggccg
atctgcgaaaccggcgacttcctcgccaaggatcgcagtctcgtcctggaagaaggcgac
ctgctggccgtacgttcggccggcgcctatggtttcgtgatgagttccaactacaacacc
cggggccgcgccgccgaggtgctggtggatggctcggccgcgcacgaagtgcgtcgccgc
gagacgatacaagagctgttcgccggcgaaagcctgctgccggactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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