KEGG   Prevotella dentalis: Prede_1741
Entry
Prede_1741        CDS       T02403                                 
Name
(GenBank) DNA/RNA helicase, superfamily I
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pdt  Prevotella dentalis
Pathway
pdt03420  Nucleotide excision repair
pdt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Prede_1741
   03430 Mismatch repair
    Prede_1741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdt03400]
    Prede_1741
Enzymes [BR:pdt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Prede_1741
DNA repair and recombination proteins [BR:pdt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Prede_1741
   MMR (mismatch excision repair)
    Other MMR factors
     Prede_1741
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30
Other DBs
NCBI-ProteinID: AGB29040
UniProt: F9D4Z5
Position
2:complement(301895..304468)
AA seq 857 aa
MQSEEQLLEQLNESQRAAVTYCDGPQLVIAGAGSGKTRVLTYKIAWLLAHYDMKPWNVLA
LTFTNKAAREMQSRIAQLVGGERARYLQMGTFHSVFSRILRVEADSIGYRSDFTIYDESD
SRSLIKNIVKSMGLEDKTYKPASVHAAISAAKNRLCMPEQYAEDGDLLARDRHHNMPETF
KIYASYQQRLRQANAMDFDDLLVNTFQMLRDHEPLRQKYAERFQYVFVDEYQDTNYVQQQ
IVTKLTRDHGRICVVGDDYQSIYAFRGAKIDNILNFNRIYPDARMFKLEQNYRSTQLIVA
AANSLMKHNSRQIPKEVYSRKEEGDKVTILETISDKREAAMVCREIRRIKNQEGCRWSDF
AILYRTNAQSRTFEEEMRKPEVGMGSHYRIYGGLSFYQRKEVKDVIAYFRLTVNPNDEEA
FRRIINYPARGIGDTTVQKIVRAAEQHEVSLWETIARPAAYGLDVNRGTLGKLAAFHALM
SGFMAKAQTTDALTLGDEIMVESGIKADLAADKTVEGDSRRQNIDALISGMADFVQAQRE
DDHADEARLQDYLATVSLMTDQDSDDGSDDKVTLMTIHAAKGLEFPTVFVVGMEENIFPS
TLSVSTPRELEEERRLLYVAITRAEKHCYLTWAHSRWLYGKMDSFVNPSRFINDIDPEFV
TVQTEGGRVGGNPFGEDRPRRRPWDEDKPARRRPWDDDYETDQPYTGARVWGGEYRRMSG
RMQNSRPVAGQFMADPKPKETAPHRPEQAVNPFSSSFEAKLRQSGKWQSVSRAMTGGGRA
EPGSASPVSAGAGSAPSASAGTGAGLHAGQVIEHQRFGRGTVVGVEGTGENRKATVDFDT
TGRKQLLLKFAKFTIVG
NT seq 2574 nt   +upstreamnt  +downstreamnt
atgcaaagtgaagaacaactgctcgaacagctcaacgaaagccagcgcgcggccgtgact
tattgcgacggcccgcagctcgtcattgccggagcagggtcgggcaagacgcgtgtgctc
acctacaagatagcctggctgctggcccactacgacatgaaaccctggaatgtgctggcc
ctcacctttaccaacaaggccgcccgcgagatgcagtcgcgcattgcacagctggtcggt
ggcgagcgggcccgctatttgcagatgggtacgttccattcggtattctcgcgcatcctc
cgtgtggaggccgacagcattggataccgcagcgatttcaccatctacgacgagagtgac
tcgcgttcgctcatcaagaacatcgtgaagtcgatggggctggaggacaagacctacaag
ccggcttccgtccatgcggccatctcggcggccaaaaaccggctgtgcatgcccgaacag
tatgccgaagacggcgacctgctggcccgcgacaggcatcacaacatgcccgagacgttc
aaaatctacgcatcgtaccagcagcgactgcgccaggccaacgccatggacttcgacgac
ttgctggtgaacaccttccaaatgctgcgcgaccatgagccgttgaggcagaaatatgca
gagcggttccagtatgtctttgtggacgaataccaggacaccaactacgtgcagcagcag
attgtgaccaagctcacccgcgaccacggccgcatctgcgtggtgggcgacgactatcag
agcatctacgctttccgtggggcaaagatagacaacatcttgaacttcaaccgcatctat
cccgacgcccggatgttcaagctggagcagaactatcggtccacgcagctcattgtggcg
gccgccaattcactgatgaaacacaactcgcggcagattcccaaggaggtgtacagccgt
aaggaggagggcgacaaggtgaccattctggaaaccatatccgacaagcgcgaggcggcc
atggtgtgccgggagattcggcgcatcaagaatcaggaggggtgccggtggagcgacttt
gctattctctaccgcacgaatgcgcagagccgcaccttcgaggaagaaatgcgcaaaccc
gaggtgggcatgggcagccactaccgcatctatggcgggctgagcttctaccagcgcaag
gaggtaaaggacgtgatagcctatttccggctgaccgtgaaccccaacgacgaggaggct
tttcgccgcatcatcaactatccggcgcggggaatcggcgacaccacggtgcagaagatt
gtccgtgcggccgagcaacacgaggtgagcctgtgggagacgattgcccgtccggccgca
tacggactggacgtgaaccgtggcacgctgggcaagctggccgccttccatgcgctgatg
agcggattcatggcgaaagcacagaccacggacgcgctgactttgggcgacgagatcatg
gtcgagagcggcatcaaggccgacctggccgctgacaagacggtggagggcgacagccgg
cggcagaacatcgacgcgctgatttcgggaatggccgattttgtgcaggcccagcgcgag
gacgaccatgccgacgaggcccggttgcaggactatctggccactgtttcgctgatgacc
gaccaggattcggacgacggctccgacgacaaagtgacgctgatgaccatccatgcggcc
aagggactggagttccccacggtgtttgtggtgggcatggaggagaacatcttcccgagc
acgctctctgtgagcacgccccgcgagctggaggaagagcgccgactgctctacgtggcc
atcacccgggccgagaagcactgctatctcacctgggcccactcgcgctggctttatggc
aagatggacagttttgtcaacccgagccggtttatcaacgacattgacccggagtttgtc
accgtccagacggagggcgggcgcgtcgggggcaatccctttggcgaagaccggccgcgc
cgtcgaccttgggacgaggacaaacctgcacgccgccgcccctgggacgacgactatgag
accgaccaaccctatacgggggcaagggtctggggaggcgaataccgccgcatgagcggg
cggatgcagaactcccgccctgtggccgggcagttcatggccgaccctaagcctaaggag
acggctccgcaccgccccgaacaggccgtcaatccgttctcttcgtcgtttgaggcgaag
ctccggcagagcgggaagtggcagagcgtgtcgcgtgccatgaccggtggcgggcgtgcc
gagccaggatctgcctctccggtttcggccggcgcgggttctgccccctctgcttcggcg
ggtacgggggccggactccatgcgggtcaggtcatcgagcatcagcgttttggccgtggc
acggtggtcggcgtggagggaacgggcgagaaccgcaaggccacggtggacttcgatacc
actggccgcaagcaactgctcctgaaattcgccaagttcaccattgtgggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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