KEGG   Pectobacterium parmentieri SCC3193: W5S_0378
Entry
W5S_0378          CDS       T02514                                 
Name
(GenBank) Guanyl-specific ribonuclease Sa
  KO
K01167  ribonuclease T1 [EC:4.6.1.24]
Organism
pec  Pectobacterium parmentieri SCC3193
Brite
KEGG Orthology (KO) [BR:pec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pec03019]
    W5S_0378
   03016 Transfer RNA biogenesis [BR:pec03016]
    W5S_0378
Enzymes [BR:pec01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.24  ribonuclease T1
     W5S_0378
Messenger RNA biogenesis [BR:pec03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     W5S_0378
Transfer RNA biogenesis [BR:pec03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    W5S_0378
 Prokaryotic type
    W5S_0378
SSDB
Motif
Pfam: Ribonuclease DUF2711
Other DBs
NCBI-ProteinID: AFI88505
UniProt: A0A0H3I3V2
Position
412761..413087
AA seq 108 aa
MAPKEMREIQNTIDNIKLNRPAYARDGINFENNYRISPNSQRLDTGSCPYQEWTVKTPGV
GNRGTRRIVVDKKTGQAYYSYDHYDSFIEINLGGDNEVKKIVYRFFLY
NT seq 327 nt   +upstreamnt  +downstreamnt
atggctccgaaagaaatgagagaaatacagaacacaatagacaatataaaattaaaccgt
ccggcctatgctagagatggtataaattttgaaaataattatcgtatatctcctaatagt
caacgactcgatacaggtagttgtccttaccaagaatggacagtaaaaacgcctggggta
ggtaaccgagggaccagacgtattgttgttgataaaaaaactggacaagcatattacagc
tacgatcactatgattcctttatcgaaattaatcttgggggggataatgaagttaaaaaa
attgtctatcgatttttcctatattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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