KEGG   Pseudonocardia sp. EC080619-01: AD017_23600
Entry
AD017_23600       CDS       T04234                                 
Name
(GenBank) hypothetical protein
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
pecq  Pseudonocardia sp. EC080619-01
Pathway
pecq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pecq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AD017_23600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pecq03400]
    AD017_23600
Enzymes [BR:pecq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AD017_23600
DNA repair and recombination proteins [BR:pecq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AD017_23600
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 PDDEXK_1 AAA_30 ResIII
Other DBs
NCBI-ProteinID: ALL83427
UniProt: A0A0P0SG99
Position
complement(4999360..5002842)
AA seq 1160 aa
MSTTAVLSAPTFAVDGPLPSGTVMLEASAGTGKTYTIAALATRYVAEGVAGLDRLMLVTF
GRDATQELRERVRERLVGTERALAAVLAGAEPPSRESDPVVAHLADAGPEEIGLRRARLA
EASASFDAATIATTHQFCRQMLAGLGVAGDNDPDAEFVEHVDDVVTEVVDDFYVRKYANP
QAGKPAFTRAEALALARRAVADPQAELEPRDADPRSVAATRHGFATAVRREVDARKRRLR
IYSYDDMLSRLAEALRDPLRGPAARERLRSRFSVVLVDEFQDTDPLQWEILSLAFHGAPA
TTLVLIGDPKQAIYAFRGADVHSYLRAADAATDRRTLATNRRSDAALLTALERVFDGAAL
GDSEIVVHPVDAHHTARRLTARRDAPLRLRAVDRDRLDLTGRKLGRAPAARRVVARDVAV
DLSELLDGSATWDGEALRPGQVAVLVRTNAQGLLVRDACAEAGVPAVLTGSTSVFTTPVA
QDWLTLLEAVEQPQRSMRLRAAALTRFVGHTVADLCGPEADRLVDRLGADLRAWHQVLAE
RGVAALQEAVFARYAPAQRLLSRPDGERDLTDLRHVGQVLHSVALERHLGPTALTEWLRH
RIGEAARDTSAERSRRLESDADAVQIVTVHRSKGLEFPVVYLPFAWDRWVNDTPDPLLYH
DVPGGAGGDARRLLDVGGTSGPDRAHRTALHLAEEAGEDLRLLYVALTRACSQVVAWWVP
STTTASSSLHRMLAGNRGPGTGPETAAAVPGDANAVQYLRERLAGSDAVVETLHDRDPVR
LPAEADGVRLAAAGFGRTLDTAWRRTSYTALTAAAHAAHHPLDDTAEADAGPAATPGVLT
EPEDEGLSDEPAADGGTGPAGAATGGATSTVDPASVPSPMADLPMGAGFGTLVHAVLEHL
DTTVAAGGDDALRAELVAHVTAELRRQPADVDPEELADALVPVLRTPLGPLAGGRALADV
APADRLSELDFELPLCGGDVPSGRLTLAGLAAVVGRHLGPGDLLHGYADRLGSPELAGQN
LRGYLTGSIDSVLRVDGRFLVVDYKTNWLGPPSVSGPREPLTAAHYTEPRLAAAMADAHY
PLQALLYAVALHRYLRWRLPGYDPEEHLGGVGYLFLRGMCGPATPVTGTGPLAAPCGVFA
WRPPSALVTELSELLDGGVR
NT seq 3483 nt   +upstreamnt  +downstreamnt
gtgagcacgaccgcggtcctctccgcaccgaccttcgccgtggacggtccgctgccgtcc
ggcaccgtcatgctggaggcgagtgccgggaccggcaagacctacacgatcgccgcgctg
gccacccgctacgtcgccgagggtgtcgccgggctggaccggctgatgctggtgaccttc
ggccgggacgcgacccaggagctgcgcgaacgggtccgggagcggctcgtcggcaccgag
cgggcgctcgccgcggtgctcgccggcgccgagccgccgtcccgggagtccgacccggtg
gtcgcgcacctcgccgacgccgggccggaggagatcgggctccggcgggcccggctggcg
gaggcgtcggcgtcgttcgacgccgcgacgatcgccaccacccaccagttctgccggcag
atgctggccggactcggggtcgccggtgacaacgacccggacgcggagttcgtcgagcac
gtcgacgacgtcgtgaccgaggtcgtcgacgacttctacgtgcgcaagtacgcgaacccg
caggccgggaagccggccttcacccgggccgaggcactggcgctggcccgccgcgcggtc
gccgacccgcaggccgagctcgagccgcgcgacgccgacccccgctcggtggccgcgacc
cggcacgggttcgccacggccgtccgccgggaggtcgacgcccgcaagcgccggctgcgc
atctacagctacgacgacatgctctcccggctggccgaggcgttgcgcgacccgctgcgc
gggccggccgcgcgcgagcggctgcggtcccgcttctcggtggtgctggtcgacgagttc
caggacaccgacccgctgcagtgggagatcctctcgctcgccttccacggcgccccggcc
acgacgctcgtgctgatcggcgacccgaaacaggcgatctacgccttccgcggcgccgac
gtgcacagctacctgcgcgccgccgacgccgcgaccgaccggcggacgctggcgacgaac
cggcgcagcgacgccgccctgctcaccgcgctggagagggtcttcgacggggcggcgctc
ggcgactccgagatcgtggtgcaccccgtcgacgcccaccacaccgcgcggcggctcacc
gcccggcgcgacgccccgctccgactgcgcgccgtcgaccgggaccggctcgacctcacc
ggccgcaagctcggccgcgcacccgcggcccggcgggtcgtggcccgcgacgtcgccgtc
gacctgtccgagctgctcgacggctccgccacctgggacggtgaggccctgcgcccgggc
caggtcgcggtgctcgtgcgcaccaacgctcagggcctgctggtgcgcgacgcctgcgcc
gaggccggggtgcccgcggtactgaccggcagcaccagcgtgttcaccacgccggtcgcc
caggactggctgaccctgctggaggcggtcgagcagccgcagcggtcgatgcggctgcgc
gcagcggcgctgacccgcttcgtcgggcacacggtcgccgatctctgcgggcccgaggcc
gaccggctcgtcgaccgcctcggcgccgacctgcgcgcgtggcaccaggtgctcgccgag
cggggggtcgccgcgctgcaggaggcggtgttcgcccgctacgccccggcgcagcggctg
ctgtcgcgccccgacggcgaacgcgacctcaccgacctccggcacgtcggtcaggtgctg
cactcggtcgcgctggagcgtcacctcggcccgaccgcgctcaccgagtggttgcggcac
cgcatcggtgaggccgcacgcgacacctccgccgagcgcagccgtcggctcgagtccgac
gccgacgccgtccagatcgtcacggtgcaccggtcgaaggggctcgagttccccgtcgtg
tacctgccgttcgcctgggaccgctgggtcaacgacaccccggacccgctgctctaccac
gacgtcccgggcggcgccggtggcgacgcgcgccggctgctcgacgtcggcgggacctcc
gggcccgaccgcgcgcaccgcaccgcgctgcacctggccgaggaggccggggaggacctg
cggctgctctacgtcgcgctgacccgggcctgcagccaggtcgtcgcgtggtgggtgccg
tcgacgacgaccgcgtcgtcgtcgctgcaccggatgctggccgggaaccgcggcccgggc
accgggcccgagacggccgccgccgtccccggtgacgcgaacgcggtgcagtacctgcgg
gaacggctcgccggcagcgacgcggtcgtcgagaccctgcacgaccgggacccggtgcgg
ctcccggccgaagcggacggggtgcggctcgccgcggccgggttcggccgcaccctggac
accgcctggcggcggacctcgtacaccgcgctcaccgcggccgcccacgccgcgcaccac
ccgctcgacgacaccgccgaggccgacgcggggccggccgccacgccgggggtgctcacc
gagcccgaggacgagggcctgagcgacgagcccgccgcggacggcggcaccggtcccgcc
ggggccgcgaccggcggtgccacctcgacggtggatcccgcgagcgtcccctcccccatg
gcggacctgccgatgggcgccgggttcggcaccctggtgcacgccgtcctcgagcacctc
gacacgaccgtcgccgccggcggcgacgacgcgttgcgggccgagctcgtcgcgcacgtc
accgccgagctgcggcgccagcccgccgacgtcgatcccgaggagctcgccgacgccctg
gtccccgtgctgcggaccccgctcgggccgctggcgggcggccgggcgctggccgacgtc
gcaccggccgatcggctgtccgagctggacttcgagctgccgctgtgcggtggcgacgtg
ccgtcgggccggctcaccctggccgggctggccgccgtcgtcgggcggcacctcggcccc
ggcgacctgctgcacggctacgccgaccggctcggctcccccgagctggccgggcagaac
ctgcgcggctacctcaccggcagcatcgactccgtgctgcgggtcgacgggcgcttcctc
gtcgtcgactacaagaccaactggctcggcccgccgtcggtctccgggccccgggagccg
ctcaccgccgcgcactacaccgagccccggctcgccgccgcgatggccgacgcccactac
ccgctgcaggcgctgctctacgccgtcgcactgcaccgctacctgcgctggcggctcccg
gggtacgacccggaggagcacctgggcggggtcggttacctgttcctgcgcgggatgtgc
ggcccggccacaccggtcaccggtaccggcccgctcgcggcgccgtgcggggtgttcgcg
tggcgcccaccctccgcgctggtgaccgagctgtccgagctgctcgacggaggcgtccga
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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