KEGG   Pedobacter sp. PACM 27299: AQ505_24245
Entry
AQ505_24245       CDS       T04140                                 
Name
(GenBank) serine--tRNA ligase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
pep  Pedobacter sp. PACM 27299
Pathway
pep00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:pep00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    AQ505_24245
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:pep01007]
    AQ505_24245
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pep03016]
    AQ505_24245
Enzymes [BR:pep01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     AQ505_24245
Amino acid related enzymes [BR:pep01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   AQ505_24245
Transfer RNA biogenesis [BR:pep03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    AQ505_24245
 Prokaryotic type
    AQ505_24245
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N STALD FapA
Other DBs
NCBI-ProteinID: ALL08310
UniProt: A0A0P0NKL5
Position
complement(5757730..5759001)
AA seq 423 aa
MLQVNYIRENRDKVLERLSVRKFKQPELVDEIIKIDEERRQAQTSLDSLSAIANSSAKQI
GELMRNGKKEEAEVLKSETTANKEQIKNLSEVLTAAEEQLFQLIVQLPNLPHESVDTGNT
AEENEEIFIHGEPAVLGENAVPHWELTTKYDIIDFELGTKITGAGFPVYKGKGARLQRAL
INYFLDKAVDAGYREMQVPLLVNEASGFGTGQLPDKEGQMYHSGIDNLYLIPTAEVPVTN
LYRDVILKEEELPIKNTAYTPCFRREAGSYGAHVRGLNRLHQFDKVELVQVVHPDHSYET
LDQMSAYVQDLLKDLGLHFRVLRLCGGDMGFAAAMTYDMEVWSAAQQRWLEVSSVSNFET
YQSTRLKLRFKGAAGKTQLAHTLNGSALALPRIVACILENNQTDKGVKIPEVLVKYTGFD
YID
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgctgcaagttaactatatccgcgaaaatagagacaaagttttagaacgactgagtgtt
cgtaaattcaagcaaccagaattggttgatgaaattattaaaattgatgaagagcgtaga
caagctcaaacctccttagattcactttccgcaattgctaattccagtgctaaacaaatt
ggtgagctgatgcgtaatggaaaaaaagaggaagcggaagtattaaagtcggagactaca
gcaaataaagaacaaatcaaaaacctttctgaggttttgactgctgcagaagagcaattg
tttcaattgatcgtacaattgcctaacctaccacatgaatctgtggatacaggtaatact
gcggaagaaaatgaagagatattcatacatggtgagcctgcagtattgggcgaaaatgca
gtaccgcattgggaactgaccaccaaatatgacattattgattttgaactgggtacaaaa
attaccggtgcaggattccctgtgtacaaaggaaaaggtgcacgcttacaaagagccctg
atcaattatttcctggataaagcagtagatgctggttacagagaaatgcaggtgccgtta
ttggtgaatgaagcatcaggttttggaacgggacaattgccggataaagaggggcagatg
taccattcaggtatagataacctttacctgatccctactgctgaagtaccggtaacgaat
ttataccgtgatgtcattttgaaagaggaagagcttccaattaaaaataccgcatataca
ccgtgtttccgtcgcgaggcaggatcttatggcgcacatgtaagaggtttaaaccgttta
caccaatttgataaagtggaattggtacaggtagtgcacccggatcattcttatgaaaca
ttagatcaaatgagtgcttatgtacaggatttgctaaaagacctgggccttcacttccgc
gttttacgtttatgtggtggtgatatgggctttgctgctgccatgacttacgatatggaa
gtatggagtgctgcacagcaacgctggttagaggtttcttctgtttcaaactttgaaact
tatcagagtacccgtctgaaattaagatttaaaggtgctgccggtaaaacacaattggcc
catactttaaacggaagtgccttggcattaccacgtattgtggcttgtattctggaaaat
aaccaaaccgataaaggggttaagattcctgaggtattggtgaaatacacaggatttgac
tatattgattag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system