KEGG T03006: SOPEG

Candidatus Sodalis pierantonius: SOPEG_0061

Entry

SOPEG_0061        CDS       T03006

Symbol

rsmB

Name

(GenBank) Ribosomal RNA small subunit methyltransferase B

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

pes Candidatus Sodalis pierantonius

Brite

KEGG Orthology (KO) [BR:pes00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pes03009]
    SOPEG_0061 (rsmB)
Enzymes [BR:pes01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     SOPEG_0061 (rsmB)
Ribosome biogenesis [BR:pes03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    SOPEG_0061 (rsmB)

SSDB

Motif

Pfam:

Methyltr_RsmB-F NusB FtsJ Methyltransf_25 Methyltr_RsmF_N Methyltransf_31 Methyltransf_15 Methyltransf_5

Other DBs

NCBI-ProteinID:

AHF72844

UniProt:

W0HGM4

Position

56871..58172

AA seq 433 aa
MKTHYNLRVIAAKAVAQVLDQGQSLGALLPPLQASLNEKDRALLQELCFGIMRVLPQLEW
ILRQLMEKPLTGKQRPVHYLLMVGLYQLIYTRIPAHAALAETVEGAVALKRPPLKGLING
VLRQFQRQQAALLAEAAQLDIRHLHPSWLQKRILAAWPAQYAQIIDANNQRPPMWLRVNR
RHHSRDAYLALLADAAIAAVAHPQLPDAIKLEVPCNVGRLPGFDRGWVTVQDASAQDCAL
LLAPQDGETILDLCAAPGGKTTHLLEIAPAARVTAVDVDGQRAARIHDNLQRLGMQAEII
IGDGRTPEDWCDNRLFNRILLDAPCSATGVIRRHPDIKWLRRDGDIAELAELQRQILHAA
WRTLKPGGTLLYATCSILPEENRGQIATFLAGHPDARLQETGDAAAPGLQCLPSPASGDG
FFYAKMIKGTQVP

NT seq 1302 nt +upstreamnt +downstreamnt
atgaaaacacactataatctccgcgttatcgccgccaaggcagtagcgcaggtgctggac
caaggccagtctctcggcgccctgttaccgccgttacaggcgtccttgaacgaaaaggac
cgggcgctgctgcaggagctctgtttcggtattatgcgcgtcctgccacagttggaatgg
atcctgcgccagctgatggaaaaaccgttgaccggtaaacagcggccggttcattacctg
ctcatggtcggtttgtatcagttgatctacacccgcatccctgcccatgccgcgctggcg
gagacggtagagggcgcggtggcgctgaaacggccgccgctcaaggggttgattaacggc
gtgttgcgccagttccaacgccagcaggcagccttgctggccgaggccgcgcaactggac
atccgccacctgcatccctcctggctgcaaaaacggatcctggccgcctggccggcgcag
tatgcgcagataatcgacgccaacaaccaacggccgccgatgtggctacgggtcaaccgc
cggcaccacagccgtgacgcctatctggcgctgctggccgatgcggctatcgccgccgtc
gcgcacccgcagttgcccgacgcgatcaagctggaggtaccgtgcaacgtcggccgcctg
cccggcttcgatcggggctgggtaacggtgcaggatgcatcggcacaggactgcgccttg
ctgctggcaccgcaggacggcgagaccatcctcgatctgtgcgccgcccccggcggcaag
accacccatcttttggagatcgcgcccgcggcgcgagtcaccgcggtggatgtggacggg
cagcgtgcggcacgaatccatgacaatctgcagcggctgggcatgcaggcggagatcatc
attggcgacgggcgtacgccggaagactggtgcgataatcggcttttcaatcgcatcctg
ctggatgcgccctgctccgcgacgggcgttatacgccggcatccggatatcaaatggctg
cgccgcgacggggatatcgccgagctggccgaactgcagcggcagatcctgcacgccgcc
tggaggaccctaaagcccggcggcacgttgctgtatgccacctgttcaattctgccggag
gaaaaccgcggccaaatcgccacttttctcgccggccatcctgacgcccggttgcaggaa
acgggcgatgccgccgctcccggtttgcaatgcttaccgtcgccggcgtcgggcgatggt
ttcttttacgctaagatgataaaagggacgcaagtcccctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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