KEGG   Candidatus Sodalis pierantonius: SOPEG_1145
Entry
SOPEG_1145        CDS       T03006                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
pes  Candidatus Sodalis pierantonius
Pathway
pes03030  DNA replication
pes03430  Mismatch repair
pes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SOPEG_1145 (holA)
   03430 Mismatch repair
    SOPEG_1145 (holA)
   03440 Homologous recombination
    SOPEG_1145 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pes03032]
    SOPEG_1145 (holA)
   03400 DNA repair and recombination proteins [BR:pes03400]
    SOPEG_1145 (holA)
Enzymes [BR:pes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SOPEG_1145 (holA)
DNA replication proteins [BR:pes03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SOPEG_1145 (holA)
DNA repair and recombination proteins [BR:pes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SOPEG_1145 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: AHF73466
UniProt: W0HI77
Position
complement(1176700..1177731)
AA seq 343 aa
MIRLYAEQLGAQLQESLRPCYLLFGNDPLLLQESQDGIRDRAQEQQFDEHFSVTLDAGTD
WDAIFSLCQARSLFASRQTLLLVLPDGGVQAAMGEKLLQLASLLHEDLLLILRGSKLTRA
LGNTAWFKALSPRAVLVSCTTPEQGQLPRWVAKRAKSMKLPLDNAACQLLCYCYEGNLLA
LAQALERLSLIYPDGSLTLPRVDAAVNDAAHFTPFHWVDAALAGKSKRAAHILRQLRLEA
AEPMILLRSIQREVLQLLTLKRQMAAAPMRTLFDRHKVWQNRRPLLTQALGRLTLPQLRD
AVALMTHIELALKQDYGYPVWSDLNALALLLCGKTLPAAMLDG
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgatccggctgtatgccgagcagttgggcgcgcagttgcaagagtcgctgcgcccctgt
tacttgctgttcggcaacgatccgctgctgctacaggaaagccaggatggtattcgcgat
cgggcccaggagcagcagttcgacgaacatttcagcgtcacgctggacgccggcaccgac
tgggacgcgatcttcagcctgtgccaggcgcgcagcctgttcgccagccgccagacgctg
ctgcttgtcctgccggacggtggcgttcaggccgccatgggggaaaagctgcttcagctg
gcgtcgctgctccatgaggatctgctgctgatcctgcgcggcagcaagctgacccgcgcc
ttggggaacaccgcctggtttaaagcgcttagcccacgggcggtgctggtgagctgcacc
acgccggagcaggggcaattgccgcgctgggtggcgaagcgcgccaaaagcatgaagctg
ccgctggataacgccgcctgccaactgctatgctattgctatgagggcaatctgctggcg
ctggcccaggcgctggagcgactgtcgctgatctacccggacggcagtctgacgctgccg
cgggtcgatgcggcggtaaacgacgccgcgcattttaccccgtttcactgggtcgacgcc
gcgctggcgggtaagagcaaacgcgccgcgcacattctgcgtcagctgcggctggaagcc
gcggagcccatgatcctgctgcgcagcattcagcgcgaagttctgcaattgctgacgctt
aaacggcaaatggccgccgcgccgatgcgcacgctcttcgaccgccataaagtgtggcag
aaccgccggccgctgcttacacaggcgttagggcggcttaccctgcctcagctgcgggac
gcggtggcgttaatgacccacattgaattggcgcttaagcaggattatggctatcccgta
tggtctgatctgaacgcgttggcgctgctcttgtgcggcaaaacgctgcccgcggcgatg
cttgatggctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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