KEGG T00095: PF3D7

Plasmodium falciparum 3D7: PF3D7_1238300

Entry

PF3D7_1238300     CDS       T00095

Name

(RefSeq) pre-mRNA-splicing factor CWC22, putative

K13100

pre-mRNA-splicing factor CWC22

Organism

pfa Plasmodium falciparum 3D7

Brite

KEGG Orthology (KO) [BR:pfa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfa03041]
    PF3D7_1238300
Spliceosome [BR:pfa03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    PF3D7_1238300
Complex C
   U4/U6.U5 tri-SnRNP related factors
    PF3D7_1238300

SSDB

Motif

Pfam:

MA3

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

PlasmoDB:

UniProt:

Position

12:1589169..1592072

AA seq 967 aa
MSSSGKNEKKKRHKDHKRNVDNNYNERIKREKKEEFGSSSSYSTDYVNKRKRMRTPSSSY
DSSLEIRKREEKKKRRNNSYPSSNSYNSNTENDSNYRKEKIKKKKDEKELKVKVASHIRK
DNNKIPDGSMSSTHSSKDKVKGKKNKKYSYEESNSISSDKYNNKEKKGSSKRSREKKKEW
SSSDNSSVYNMKRNKKDKRKGSYEGKNVYIRRSVSSRSVSSDSNKSESNKIESNESVSSR
SVSSESNKSESNKSESNKSESNESESNKSESNESESNKSESNKSESNKSESNESESNKSE
SNESESNESYSKKSISNKKYKNKRYKNKRDKNKRYKNKRYKSKRYKSKSKSSLSSCDEKK
KKGYEEFEEDDKNTEETLEINEDLIEYAKQKISNVTIDDIGKAGGVYIPPFKLERLKTEV
TNKKSVLYQKQEWMKLKKKINNIVNKVNIDNISEVCYELFECNLIRGKGLFSRALIHAQL
SSPAFTNVFTCLLCIVNSKFPNIGLLTIQRIILHFRRAYKRNDKILCFNTVKFIAHMINQ
RIVHEIVGLQLCSLLLQNITNDSVQVCTYFLAEVGELYTNICRKGLDIIFDRLKDIIQEG
QINIKTQYDIEKLWNYRKNNFKDFPSVHDDLNLIDEEDKIVHEIDILDESFNSQEELNIF
REVPYEQYEEEENEWKHISEELLFGDDSADEKKNKKTKKQKKKEKNESERENESENESES
EKLGNDDLDENNNSSEDSEAEKSDSNDDDEDENNDSDNHEEIHDMTEQYLINLRKNVYLS
IMSSLSYEECVHKLLKLNIKKGYEIEICNMLIDCCCMEKTFQKFYALQAERLCKLKKIYQ
ENFEKCFDNSFNTAHRLETAKLRNCSKFFAHLLYTDAISWSIFKIIKLTEEDTTSSTRIF
IKILLQELTNNLGLQAFYHKINHPAISPFLIGLFPTNNAQNIRFCINFFTAIGLGALTSS
LRKLLLT

NT seq 2904 nt +upstreamnt +downstreamnt
atgagtagtagtggaaaaaatgaaaagaaaaaaaggcataaagatcacaaaagaaatgtg
gataataattataatgaaagaataaaaagagagaaaaaggaagagtttggttcctcatcg
tcttattcaacagactatgttaataaaagaaagaggatgaggaccccgtcttcatcttat
gatagtagtttagaaataagaaaacgtgaggaaaaaaagaaaagaagaaataattcttat
ccttcatccaatagttataatagtaatacagaaaatgattcgaattataggaaagaaaaa
ataaaaaagaaaaaagatgaaaaagaactaaaggttaaagttgcaagtcatataagaaaa
gataataataaaattccagatggaagtatgtcttctacgcattcaagtaaagataaggta
aaaggaaaaaaaaataaaaaatattcttatgaggaatctaattcaattagtagtgataaa
tataataataaagaaaaaaagggtagttcaaagcgttccagggaaaaaaagaaggaatgg
agttcatcagataattcaagtgtgtataacatgaaaagaaataaaaaggataaaagaaaa
gggtcttatgaaggtaaaaatgtgtatataaggagaagtgttagtagtaggagtgtcagc
agtgatagtaataaaagtgaaagtaataaaattgaaagtaatgaaagtgttagtagtagg
agtgtcagcagtgaaagtaataaaagtgaaagtaataaaagtgaaagtaataaaagtgaa
agtaatgaaagtgaaagtaataaaagtgaaagtaatgaaagtgaaagtaataaaagtgaa
agtaataaaagtgaaagtaataaaagtgaaagtaatgaaagtgaaagtaataaaagtgaa
agtaatgaaagtgaaagtaatgaaagttatagtaaaaaaagtataagtaacaaaaagtat
aagaacaaaagatataagaacaaaagagataagaacaaaagatataagaacaaaagatat
aagagcaaaagatataagagcaaaagtaagagttccttaagtagttgtgatgaaaagaag
aaaaaaggatatgaggaattcgaagaagatgataaaaatactgaggaaacattagaaatt
aacgaagatttaattgaatatgcaaaacaaaagatttctaatgttacaattgacgatata
ggaaaagctggtggtgtttatattcctccatttaagttggaaagattaaaaactgaggtt
acaaataagaaaagtgttttatatcaaaaacaagaatggatgaaattaaaaaagaaaata
aataatattgtaaataaagtaaatatagataatataagtgaagtatgttatgaattattt
gaatgtaatttaatacgtgggaaaggattatttagtcgtgccttaatacatgcacaatta
agttctccagcatttacaaatgtatttacatgtttattatgtatagtaaattctaaattt
cctaatattggtttattaacaatacaaaggataatattgcattttagaagagcatataaa
aggaatgataaaatattatgttttaatactgttaaatttatagcacatatgattaatcaa
agaatagtacacgaaattgtaggtttacaattatgctctttacttttacaaaatataacg
aatgattcggttcaagtatgtacatactttttagcagaggttggagaattatatactaat
atttgtagaaaggggttagatatcatttttgatagactcaaagatattattcaagaggga
caaattaatataaaaactcaatatgatattgaaaaattatggaattatagaaaaaataat
tttaaagatttcccatcggttcatgatgatttaaatttaattgatgaagaggataaaata
gtacatgagattgatatattggatgagagttttaatagtcaggaagaattaaatatattt
agagaagttccttatgaacaatatgaagaagaggaaaatgaatggaaacatatatcggaa
gaattgttatttggagacgattcagcagatgagaaaaaaaacaaaaaaacaaaaaaacaa
aaaaaaaaagaaaaaaatgaaagcgaaagggaaaacgaaagtgaaaacgaaagtgaaagt
gaaaaattaggtaatgatgatttagacgaaaataataatagcagtgaagatagtgaagcc
gaaaaaagtgatagtaatgatgacgatgaggatgaaaataatgatagcgacaatcatgaa
gaaatacatgatatgactgaacaatatttaataaatttaagaaaaaatgtatatttatca
ataatgtcatcattaagttatgaagaatgtgttcataaattattaaaattaaatattaaa
aaaggatatgaaatagaaatatgtaatatgttaatagattgctgttgtatggaaaaaaca
tttcaaaagttttatgccttacaagcagaaagattatgtaaattaaaaaaaatttatcaa
gaaaatttcgaaaagtgttttgataactcatttaatacagctcatagattggaaacagct
aaattaagaaactgctcaaaattttttgcacatttattatatactgatgcaatatcttgg
agtatttttaaaattattaaattaacagaagaagacacaacatcatcaacaagaatattt
attaaaatcttgttacaagaattaacaaataatttaggactacaagcattttatcataaa
ataaatcacccagctatatcgccatttttaataggattatttcctacaaataatgcacaa
aatataagattctgtattaacttctttacagccataggtttaggggccttaacatcatca
ttgaggaaattattgttaacctaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PLASMODB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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