KEGG   Plasmodium falciparum 3D7: PF3D7_1364800
Entry
PF3D7_1364800     CDS       T00095                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03020  RNA polymerase
pfa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PF3D7_1364800
  09124 Replication and repair
   03420 Nucleotide excision repair
    PF3D7_1364800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfa03021]
    PF3D7_1364800
   03400 DNA repair and recombination proteins [BR:pfa03400]
    PF3D7_1364800
Transcription machinery [BR:pfa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PF3D7_1364800
  RNA polymerase III system
   RNA polymerase III
     PF3D7_1364800
  RNA polymerase I system
   RNA polymerase I
     PF3D7_1364800
DNA repair and recombination proteins [BR:pfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PF3D7_1364800
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat
Other DBs
NCBI-GeneID: 814300
NCBI-ProteinID: XP_001350359
PlasmoDB: PF3D7_1364800
UniProt: Q8ID59
Position
13:complement(join(2603463..2603528,2603755..2603829,2603962..2604045,2604158..2604217,2604321..2604402,2604592..2604699,2604830..2604972))
AA seq 205 aa
MEDPVTRFYKCRKTCCEMLEDRGYIMTPREKLENFSTFKEMFEDNDRQRSKMGISTTHKN
DSNNRIIVYFADEVKKTGVKPLRELTERMEEKSIQRAILVTQNILTPFARDAIKEAAPRH
IIENFLDTELLVNITKHELVPRHIPLTSDEKKNLLQRYKIMENKLPRIQDVDPVCRYFGL
SKGQVVKIIRPSETAGRYVTYRLVV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggaagatccagtaacgaggttttataaatgtcgaaaaacgtgttgtgaaatgttggag
gataggggttatattatgactccaagagaaaagcttgaaaacttttcaactttcaaagaa
atgtttgaggataatgatagacaacgatctaaaatgggtattagtactactcataaaaat
gattcaaacaatagaattatagtttattttgctgatgaagttaaaaaaacaggggttaaa
ccactaagggaattaaccgaaaggatggaagaaaaatcaattcagcgtgctattcttgta
acacaaaatatattaaccccttttgccagagatgccattaaggaagcagcaccaagacac
attatagaaaactttttggatactgaattattggttaatataacaaaacacgaattagtc
cccagacatattcctctaacaagcgatgaaaaaaaaaacttgctccaaagatataaaatt
atggaaaacaaattaccaagaattcaagatgtcgatcctgtgtgtcgttattttggatta
tcaaaaggacaggttgttaaaattattaggcctagtgaaacagcaggaagatatgttacc
tacagattggtagtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PLASMODB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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