KEGG   Plasmodium falciparum 3D7: PF3D7_1420000
Entry
PF3D7_1420000     CDS       T00095                                 
Name
(RefSeq) splicing factor 3B subunit 4, putative
  KO
K12831  splicing factor 3B subunit 4
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PF3D7_1420000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfa03041]
    PF3D7_1420000
Spliceosome [BR:pfa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PF3D7_1420000
 Complex B
    PF3D7_1420000
 Complex C
   U2 SnRNP specific factors
    PF3D7_1420000
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 811775
NCBI-ProteinID: XP_001348367
PlasmoDB: PF3D7_1420000
UniProt: Q8ILQ0
Position
14:complement(join(828904..830174,830359..830469,830701..830773))
AA seq 484 aa
MFTQHKNQEISHIYERNNEATLYIANLDAQVDEEILCELFMQCGNVKNVHIPRDKINGYH
AGYGFVEYEYEYECEYAANILNMTKLFGKALRCNKATQDKRSFDVGANLFIGNLDDEVDE
KMLFDIFSSFGQIMTVKVMRNEDDTSKGHGFISYDNFESSDLAIENMNNQFICNKKVHIS
YAFKKDSKGERHGTAAERFIAANKALNLYPLNENNNNNNVNPSPFTSSNDIPLTNNTTLN
LTNNVYLNNTIITNNIIPKLSNDTISPIMNNFYPPNPHQPTSSNYLQAQVGHPTNIPMNA
RGSTSFMIPPKINNRIGNILPSNISSNLPPNIPPNLPPNFPPNFPPNLPPNLPPTLPPTL
PPTLPPTLPPNLPPTLPPTLPPNLPPTLPPTLPPNLPPNLPPNFPPTLPPNFPPTLPPNF
PPTLPPNFPPGFPPNLPPNFPPTLPPNIPPGFPPNIPPNLPPNIPSYSENNLNTKGENKE
NTSD
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgttcacccaacataaaaaccaggaaataagtcatatttatgagagaaacaatgaagcg
acactttatatagcaaatttggatgcacaagttgacgaagaaatattatgtgaacttttt
atgcaatgtgggaatgtaaaaaatgtccatattcctcgagataagataaatggatatcat
gcagggtacggatttgtagagtatgaatacgaatacgagtgcgaatatgcagcaaatatt
ttaaatatgaccaagctgtttgggaaagcattaagatgtaacaaagcaacacaagataag
agatctttcgatgtgggagcaaatttatttataggaaatttagatgacgaagtagatgag
aaaatgctatttgatatattttcatcatttggtcaaataatgacagtgaaagttatgagg
aatgaagatgatacatctaaaggtcatggatttatttcttatgataattttgaatcaagt
gatttagccatagaaaatatgaataatcaatttatatgtaataaaaaggtacatatatca
tatgcttttaaaaaagatagtaaaggagaaagacatggaacagcagctgaaagatttata
gcagctaataaagctttaaatttatatccattaaatgaaaataataataataataatgtt
aatccatcaccatttacatcatcaaatgatattccattaactaataatacaacattaaat
cttacgaataatgtatatttaaataatacaataataacaaataatattatacctaaatta
tcaaatgatacaatatctccaattatgaataatttctatcctcctaatcctcatcaacca
acttcatcaaattatttacaggcgcaagtaggacatcctacaaatattcctatgaatgct
agaggaagtacttcttttatgatacctccaaaaattaataatagaattgggaatatttta
ccatctaacatatcatctaacttaccacctaatataccacctaacttaccacctaatttt
ccacctaattttccacctaatttaccacctaatttaccacctactttaccacctacttta
ccacctactttaccacctactttaccacctaatttaccacctactttaccacctacttta
ccacctaatttaccacctactttaccacctactttaccacctaatctaccacctaatcta
ccaccaaactttccacctaccttaccacccaactttccacctactttaccacctaacttt
ccacctactttaccacctaactttcctcctggatttccaccaaatttacctcctaatttt
ccacctacattaccacctaatatacctccaggctttcctcccaatatccctcccaaccta
ccgcctaatattccatcatattctgaaaataacttaaatacaaaaggcgagaacaaggag
aatacaagcgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PLASMODB (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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