KEGG   Pseudomonas synxantha LBUM223: VO64_2081
Entry
VO64_2081         CDS       T03769                                 
Name
(GenBank) Poly(A) polymerase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
pfb  Pseudomonas synxantha LBUM223
Pathway
pfb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pfb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    VO64_2081
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfb03019]
    VO64_2081
Enzymes [BR:pfb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     VO64_2081
Messenger RNA biogenesis [BR:pfb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     VO64_2081
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: AKA82627
Position
2325938..2327341
AA seq 467 aa
MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAG
HPQNDEEEDTNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNNLIRLIGDPTQRYQEDPVRMLRAVRFAAKLNFGIEKHTAAPIRELAPMLREIPSA
RLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISEALVNTDLR
IKQNKPVTPAFLFAALLWPALPKRVLRLQDRGMPPIPAMQEAAHELITEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSQRREMIRELGSKGDGVGEGPKKRRRSGSKRKRNAADASGAAGE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgctgaagaagttgttccagtcattccgttctcccttgcgtcgaacgcaacacaaacgc
agcacgcctgaagtgctcaatagcagccagcattcgctgcaacgggctcaattcagccgt
tacgcagtgaacatcgtcgaacgtttgcagaacgccggctaccaggcttacctggtgggt
ggttgcgtacgcgacatgctgctcaatatcacgcccaaggatttcgacgtcgccaccagc
gccacgcctgaacaggtacgtgccgagtttcgtaatgcacgcatcatcggccggcgcttc
aagttggtgcatatccactttggacgcgaaatcatcgaggtcgccaccttccgcgccggc
cacccgcaaaacgacgaagaggaagacaccaatcagtcttcccgcaacgaaagcgggcgc
atcctgcgcgacaatgtctacggcaccctggaggaagacgcgcaacgtcgcgacttcacc
atcaatgccctgtattacgacccggtcagcgagcgcatcctcgattacgccaatggcgta
cacgacatccgcaataacctgatccgcctgatcggcgacccaacgcagcgctaccaggaa
gacccggtgcgcatgctgcgggccgtgcgcttcgcggccaagctcaactttggtatcgag
aagcacaccgctgcgccgattcgcgagctggcgccaatgctgcgggaaattccctcggcg
cgcctgttcgaagaagtgctcaagctgtttctctcgggctatgccgccgacaccttcgaa
atgcttgtcgacctgcagttgttcgatccattgttcccggccagcgccgaggccttggaa
tacaacccaacgtacacgcacacactgatcagcgaagcgttggtcaacactgacctgcgc
atcaagcagaacaaaccggtaaccccagcgttcctgtttgccgccctgttgtggccagcc
ctgcccaagcgagtgctgcgcctgcaggaccgtggcatgccgccgatcccggccatgcaa
gaagcggcacacgagctgatcaccgaacagtgccaacgcatcgccatcccaaaacgcttc
accatgccgatccgcgagatctgggacatgcaggagcgcctgccgcgccgcagcggcaaa
cgcgccgacctgttgctcgacaacccgcgcttccgtgccggctacgacttcctgctgctg
cgcgaaagcgccggcgagcaaaccgacggcctgggcgaatggtggaccgactatcaggac
gccaatgatagccagcgccgcgaaatgattcgcgagctgggcagtaaaggcgatggtgtc
ggtgaaggaccgaagaagcgtcgccgcagcggtagcaagcgtaaacgcaacgccgccgac
gcctcgggcgccgcaggggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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