KEGG T01051: PFDG

Plasmodium falciparum Dd2: PFDG_01152

Entry

PFDG_01152        CDS       T01051

Name

(Broad) hypothetical protein

K12820

pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]

Organism

pfd Plasmodium falciparum Dd2

Pathway

pfd03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:pfd00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PFDG_01152
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfd03041]
    PFDG_01152
   03009 Ribosome biogenesis [BR:pfd03009]
    PFDG_01152
Enzymes [BR:pfd01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     PFDG_01152
Spliceosome [BR:pfd03041]
Complex A
  U2 snRNP components
   U2 related factors
    PFDG_01152
Complex B
    PFDG_01152
Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    PFDG_01152
Ribosome biogenesis [BR:pfd03009]
Eukaryotic type
  90S particles
   Helicases
    PFDG_01152

SSDB

Motif

Pfam:

OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 Flavi_DEAD nSTAND3 AAA_19 ResIII T2SSE SRP54 ATPase Helicase_RecD AAA_7 AAA_30 Roc TsaE PhoH TniB

AA seq 820 aa
MSEEEDNQSNNISLERNTVSEECTYSTNERTKKKKLDNIIDEENNKKIKLNNNCYEQDDD
EQTLFDNNKINEYNILDNKNVDSNITNNINLNKCNVKVENNILNNITNVQNDILSKENNN
NNNYNNVQPTTHTSVVTNNEDDSMINKLTNQKYSQRYLQLLEEKKKLPAWSAKKNFLKLL
KKNNVLIIVGDTGSGKTTQISQFVLESKYTEKKSIAVTQPRRVAAMSVAARVSEELDVEL
GTYVGYTIRFEDKSSNKTIIKYLTDGMLLRESMSDPLLTKYNTIILDEAHERTLATDILF
GVIKNIQEKRNDLKLIVMSATLDAEKFQKFFNNSKILNIPGRLFPVEIFYTLQAEKDYVK
VVIRTVYDIHINEEEGDILVFLTGEEEIEMTKKEIERVVSRNMNAGQLVVLPLYSSLPPA
QQQKIFEPPPKPRFKGDKNGRKCILATNIAETSITIDGIVYVIDPGFSKQKVYNPRARIE
SLLIAPISKASAEQRAGRAGRTKPGKCFRLYTEKCFEETLPEQTYPEILRSNLGSVVLNL
KKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDEGDLTNKGHLMSEFPVDPQLAKV
LIESPNYSCSSEILTIAAMLSVPNCFLRPKVKVKEADEMKMRFSHLDGDHLTLLNVFHAY
VKHALVDTNESKKFCFEYFLNHRAMTSAQNVRQQLLRIMERLNLKILSIKPSNPEYYINI
RKALLSGFYQQVAYKTTKGYYITVKDIQMVTLHPSTVFQMNPEWVVYHELLLTSKNFIRT
VTKIEGKWLLEIAPNYYNLEDLPNSEAKNDLKMLHKKLNH

NT seq 2463 nt +upstreamnt +downstreamnt
atgagcgaagaggaagataatcaatccaataatatttcgctagaacgaaatactgtatca
gaagaatgtacatatagtacgaatgaacgtaccaaaaaaaaaaaactagataatataata
gatgaggaaaataataagaagataaaattaaataataattgttatgaacaagacgatgac
gaacaaaccttatttgataataataagataaatgaatataatattcttgataataaaaat
gtggattctaatataactaataatataaatctaaataagtgcaatgttaaggtagaaaat
aatattttaaataatattacaaatgtacaaaatgatatattatctaaagaaaataataat
aataataattataataatgttcaacctactactcatacaagtgtcgtcactaataatgag
gacgattcaatgattaacaaattgaccaatcaaaaatatagtcagagatatctacaactt
ttagaagagaaaaaaaagttacccgcatggagtgcaaaaaagaactttttaaaattgctc
aaaaaaaataatgtgctaattatcgttggagatacaggtagtggaaaaacaacacaaata
tctcaattcgttttagaatcaaaatatacggaaaagaaatctatagctgttacacaacca
agaagggtagcagctatgagcgtagctgcacgagtatccgaagaattagatgttgaatta
ggtacttatgttggttataccataagatttgaagataaatctagtaataaaactataata
aaatatttaacagatggtatgttattaagagaatctatgagtgatcctctgttaacaaaa
tataatactataatattagatgaagcacatgaaaggacattagctacagatatattattt
ggcgtcataaaaaatattcaagaaaaaagaaatgatttaaaattaatagtaatgtctgca
acattagatgcagaaaagtttcaaaaattttttaataattcaaaaattttaaatatacca
ggaagattatttcctgtggaaatattttataccttacaagctgaaaaggattatgtaaag
gttgtaattaggacagtatatgatatacatataaatgaagaagaaggagatattttggtt
tttttaacaggtgaagaagaaattgaaatgacgaaaaaagaaattgaaagagttgtttca
agaaatatgaatgctggtcaattggttgtacttcctttatattcatctttaccacctgca
caacagcaaaaaatatttgaaccaccaccaaaacctagatttaaaggtgataaaaatgga
cgaaaatgtatattagcaacaaatattgcagaaacatccataactattgatggtattgtt
tatgtaattgatccaggtttttcaaaacaaaaagtatataatcctagggctcgtatcgag
tccttacttattgcaccaatatctaaagcttctgctgaacaaagagctggaagagctggt
agaactaaaccaggaaaatgttttagattgtatactgaaaaatgttttgaagaaacctta
ccagaacaaacatatccagaaatattaagatcgaatttaggttcagttgtattaaattta
aagaaattagggatcgacgatttagttcattttgattttatggatccccctgctccagaa
acattgatgagagcattagagcaattaaattatttgggagctttagatgacgaaggagat
ttaacaaacaaaggacatttaatgtctgaattccctgtagatcctcagctagcgaaagtg
ttaattgaatccccaaattattcatgttcaagtgaaatattaacaatagctgcaatgtta
tctgttcctaattgttttctaagaccaaaggtaaaggttaaagaagcagatgaaatgaaa
atgagattttcacatttagatggggatcatttaactttacttaatgtatttcatgcatat
gtaaaacatgcacttgttgacacaaatgaatcaaagaaattttgttttgaatatttttta
aatcatagagctatgacatcggctcaaaatgtaagacaacaattattaagaattatggaa
agattaaatttaaaaattctttctattaaaccttcaaaccctgaatattatataaatatt
aggaaagccttattaagtggattttatcaacaagtagcatataaaacaactaaaggatat
tacattactgttaaagatatacaaatggtaaccttacacccatctaccgtttttcaaatg
aatccagaatgggttgtatatcatgaactcttattaactagtaaaaattttataagaact
gtaacaaaaattgagggaaaatggctactagaaatagctccaaattattataacttagaa
gatcttccaaatagtgaagcaaaaaatgacctcaaaatgttgcataaaaaattgaaccat
tga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (28)   

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