KEGG   Plasmodium falciparum Dd2: PFDG_01423
Entry
PFDG_01423        CDS       T01051                                 
Name
(Broad) hypothetical protein
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
pfd  Plasmodium falciparum Dd2
Pathway
pfd03018  RNA degradation
pfd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PFDG_01423
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PFDG_01423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfd03019]
    PFDG_01423
   03041 Spliceosome [BR:pfd03041]
    PFDG_01423
Messenger RNA biogenesis [BR:pfd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PFDG_01423
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PFDG_01423
Spliceosome [BR:pfd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    PFDG_01423
SSDB
Motif
Pfam: LSM SM-ATX
AA seq 77 aa
MSTNSPKDFVESLKGRAVIVRLNNGTDYKGILACLDERMNVALEQTEEYYDGELTDKYND
AFIRGNNVFYIRAIEED
NT seq 234 nt   +upstreamnt  +downstreamnt
atgtcaacaaattcgccaaaggattttgtggaaagtttaaaaggtcgagcagtaattgtt
aggttgaataacggtacggattataagggcatccttgcttgtttagatgaacgtatgaac
gtagcactagaacaaactgaagaatattatgatggtgaattaacagataaatataatgat
gcttttataagaggaaataatgtattttatataagagccattgaagaagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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