KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF701170
Entry
PFLUOLIPICF701170 CDS       T03767                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pff  Pseudomonas simiae PICF7
Pathway
pff03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pff00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    PFLUOLIPICF701170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pff03400]
    PFLUOLIPICF701170
Enzymes [BR:pff01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     PFLUOLIPICF701170
DNA repair and recombination proteins [BR:pff03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     PFLUOLIPICF701170
 Prokaryotic type
     PFLUOLIPICF701170
SSDB
Motif
Pfam: UDG AAA_29
Other DBs
NCBI-ProteinID: AJZ92276
Position
complement(253257..253949)
AA seq 230 aa
MTEDDRIKLEPSWKHALRDQFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIEWRLPPV
NT seq 693 nt   +upstreamnt  +downstreamnt
atgaccgaagacgaccgtatcaaactcgaacccagctggaaacacgccctgcgggatcag
ttcgagcagccgtacatggcccagctgcgcgagttcctgcgccaggaacatgccgccggc
aaagagatctacccgcccggcccgctgattttcaacgcgctcaattccacgccgttggat
aaggtcaaagtcgtgatcctcggccaggacccgtaccacggccccggccaggcccacggc
ctgtgcttctcggtgcaaccgggtgtgccggcgccgccgtcactggtcaatatctataaa
gagcttaagcgcgacctgaacatcgacatccccaatcacggctacctgcaaagctgggcc
gaccagggcgtgctgatgctcaacaccaccatgaccgtcgagcgcgccaacgccaacgcc
catgcgggcaagggctggcagttctttaccgatcggattatcgaggtggtcagcgaacat
cagccgcacctggtgtttttgctctggggcgctcatgcccaaggcaagcagaagctgatc
gatgccaccaagcacctggtgctgacctcggtgcacccgtcgccactgtcggcgtatcgc
gggtttttgggttgcgggcatttcagtcgcaccaacaagtttcttgagcagaatggcgag
acgccgatcgagtggcggttgccgcctgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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