KEGG   Pseudomonas simiae PICF7: PFLUOLIPICF722535
Entry
PFLUOLIPICF722535 CDS       T03767                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pff  Pseudomonas simiae PICF7
Brite
KEGG Orthology (KO) [BR:pff00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pff03032]
    PFLUOLIPICF722535
   03400 DNA repair and recombination proteins [BR:pff03400]
    PFLUOLIPICF722535
Enzymes [BR:pff01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     PFLUOLIPICF722535
DNA replication proteins [BR:pff03032]
 Prokaryotic type
  DNA Topoisomerases
   PFLUOLIPICF722535
DNA repair and recombination proteins [BR:pff03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      PFLUOLIPICF722535
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AJZ95942
Position
complement(4829980..4831017)
AA seq 345 aa
MSDSALPRDLHYVDDTQPGIRRKTVRGRFQYFDPQGVRITDAEEIKRLNALAVPPAYTDV
WICADPRGHLQATGRDARGRKQYRYHPRWREVRDSDKYSRLQEFGNALPKLRKQLEAKIA
EPGFTREKVLATVVMLLDATLIRVGNTQYARDNKSYGLTTLRTRHVDVKGSEIQFQFRGK
SGVEHQISVKDRRLATVVKRCLELPGQNLFQYLDEDGERHTVSSHDVNDYLHSLTGADFT
AKDYRTWAGTAMALAVLRELEWQPESDAKRHVVAMVKDVAKQLGNTPAVCRKCYIHPAVL
EHFSLGELSKLPKPRLRKGLKAEEVALAMFLEQLAADLPKKAKTG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgtctgactctgcactgccccgcgacctgcattacgttgacgacacccagcccggcatc
cgccgtaagacagtgcggggcaggttccaatacttcgacccccagggcgtgcgcattacc
gatgccgaggagatcaagcgcctgaacgccctggcggtcccgccggcgtacaccgacgta
tggatctgcgccgacccgcgcgggcatctgcaagccaccggccgcgacgcccgtggacgt
aagcaataccgttatcacccgcgctggcgcgaggtgcgcgacagtgacaagtactcccgg
ttgcaggagttcggcaacgccctgccgaaattgcgcaagcagttggaggcaaaaatcgcc
gaacccggcttcacccgtgaaaaagtcttggccacggtggtgatgctgctcgacgccaca
ctgatccgcgtcggcaatacccagtatgcgcgggacaacaaatcctacgggctgaccacc
ctgcgcacccgccatgtggatgtgaaaggcagcgaaatccagttccagtttcgcggcaag
agtggcgtggagcaccagatcagcgtcaaggaccgccgcttggccacggtggtcaagcgc
tgcctggaattgccagggcagaacctgttccagtacctggacgaggatggcgagcgccac
accgtcagctcccacgacgtgaatgactacctgcacagcctcactggcgccgactttacc
gccaaggactaccgcacctgggccggcaccgccatggcgctggccgtgttgcgggaattg
gagtggcagcccgagtccgatgccaaaaggcacgtggtggcgatggtcaaggatgtcgcc
aagcagctgggtaacaccccggcggtgtgccgcaagtgttacatccaccctgcggtgctg
gagcatttcagcctcggcgaactctccaaattgcccaagccgcggttgcgcaaagggctc
aaggctgaagaagtggccttggcgatgttccttgagcaactggcggcggacttgccgaaa
aaagccaagacgggttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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