KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_116328
Entry
MYCFIDRAFT_116328 CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K18422  helicase MOV-10 [EC:5.6.2.5]
Organism
pfj  Pseudocercospora fijiensis
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pfj03019]
    MYCFIDRAFT_116328
   03036 Chromosome and associated proteins [BR:pfj03036]
    MYCFIDRAFT_116328
Enzymes [BR:pfj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.5  RNA 5'-3' helicase
     MYCFIDRAFT_116328
Messenger RNA biogenesis [BR:pfj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     MYCFIDRAFT_116328
Chromosome and associated proteins [BR:pfj03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Other miRNA pathway proteins
     MYCFIDRAFT_116328
SSDB
Motif
Pfam: AAA_12 AAA_11 AAA_19 AAA_30 Viral_helicase1 UvrD-helicase ResIII Helicase_RecD SLFN-g3_helicase AAA_16 DEAD AAA_22 T2SSE nSTAND3 AAA PhoH AAA_5
Other DBs
NCBI-GeneID: 19330309
NCBI-ProteinID: XP_007926548
JGI: 116328
UniProt: M3AFB1
Position
Unknown
AA seq 502 aa
QNSWLRAMLFPTHDDGAMQHKLNPSTFNCVQFDDELNHEQLKAVHTVLREKYGRLPYLIS
GPPGTGKTKTVVEIALQLIHDHSTTAVLLCAPSDPAADTIVHRLSKHLTPNQLLRMNSPA
RSFPEVPSSIMPFCHIEDKFFSLPPFPELMRKRIVVTTVRDTEVLHQARLTNRDLFALER
GLYTALHQEDMPYVPSLHWSALLMDEAAQATEPEALLPLLAVAPPENALQDLKPPLVVMV
GDQNQLGPRTASKKAGIQKSLFERLLSRSIYCEHPLARSKQKGGHVPRLTRDMLPITRPP
FTDLIRNYRSHPAILATPSSLFYNDTLEPCASGVESLLPWYGFKGRQLPVLFRDNRSGDE
IEQDGGGWFNLGEADIALAIAQSFLRQELLQPEQICIMSPFRAQVKVLRRKAREQLKPGI
NIGPLEAFQGLESRLVILCTTRTRDRFIDQDIARGLGVIHEPRRFNVALTRAKEGLVVIG
NPDVLDLDENWASFLAFCKRTG
NT seq 1506 nt   +upstreamnt  +downstreamnt
caaaatagctggctgcgagcgatgttgttccctactcacgatgacggcgcaatgcagcac
aaactgaatccgagtaccttcaactgcgttcaatttgatgacgagctcaaccatgagcag
ctcaaagcagttcataccgttttgagggagaagtatggtcgattgccttacttgatttcg
ggaccgccaggaacagggaaaacaaagacggtcgtcgagattgccctgcaactaattcat
gaccacagtaccactgcagtcctgctttgtgcaccttccgatcccgcggccgacaccata
gttcaccggctcagcaagcatctcacaccgaatcagctcttgagaatgaactcgccagca
cgcagtttccccgaagtcccgagctccataatgcccttctgtcatatcgaggataagttc
ttctctttgccgccctttccagaactcatgcggaagcgcatcgtagtcaccacagttcgt
gatactgaagtcttacatcaggcacgacttaccaatcgggacctgttcgcactcgagcga
ggcttatacactgctcttcaccaagaagacatgccatacgtgccatctttgcactggtcc
gcgcttcttatggatgaagccgcacaagctacggaaccagaagctctattgccgcttctt
gcggtcgcacctcccgagaatgccttacaggatctcaaaccacctcttgttgtgatggta
ggggaccaaaatcagctcggaccacgaacagcatcgaaaaaggcgggtatacagaagtcc
ctttttgaacgtcttctttcccgctcaatttattgcgagcatcccttggctcgttcgaag
cagaaaggggggcatgttccgcgcctaacgagagatatgctgccgatcacaagaccgcca
ttcacagacttgatcagaaactatcgctctcatcccgcaattctagcgacaccatcttcg
ctcttttacaacgacactcttgagccatgcgctagcggagtcgagtcgcttctgccgtgg
tacggattcaaaggtcgccagttaccggtcctgttccgagacaaccgaagcggtgatgag
atcgagcaagacggaggtggctggttcaacctgggcgaagcggacatcgcactcgcaatt
gcacaatcattcttacgacaggagctgctgcagcctgagcagatttgtatcatgagccca
ttccgagctcaagtcaaggtgctccgaagaaaggcacgcgagcagttgaagccgggtatc
aatatcgggcccctcgaggctttccagggattagagtcaaggctggtgattttatgtaca
acaagaacaagggatcgcttcattgaccaagacattgctcgaggccttggcgtgatacat
gagccgaggagattcaatgtggcattgacgcgcgctaaggagggtcttgttgtgattggc
aatccagatgtactggatttggatgagaactgggcatcctttctggcgttttgcaaacgc
actgga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (30)   

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