KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_70882
Entry
MYCFIDRAFT_70882  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03020  RNA polymerase
pfj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MYCFIDRAFT_70882
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYCFIDRAFT_70882
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfj03021]
    MYCFIDRAFT_70882
   03400 DNA repair and recombination proteins [BR:pfj03400]
    MYCFIDRAFT_70882
Transcription machinery [BR:pfj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MYCFIDRAFT_70882
  RNA polymerase III system
   RNA polymerase III
     MYCFIDRAFT_70882
  RNA polymerase I system
   RNA polymerase I
     MYCFIDRAFT_70882
DNA repair and recombination proteins [BR:pfj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MYCFIDRAFT_70882
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Sld3_N Herpes_PAP Sof1
Other DBs
NCBI-GeneID: 19340938
NCBI-ProteinID: XP_007928060
JGI: 70882
UniProt: M2ZQT1
Position
Unknown
AA seq 227 aa
MSDENSRELSRLWRVLRTTKQMCSDRGYELTDEECNISLEEFRQQYADESGAPSRVKMAF
TARPSDAMIKKYTPIQRPGQDEKPPEIGTIHVEFSNDASIGIKQLKQFASNLADKNYYTG
IYVSQVQPTSAALKIIPSVHPLIMEIFKEDDLLVNISRHELVPKHILLSQEEKRGLLERY
RLKETQLPRIRIDDPMARYLGLRRAQVVKIIRKSETAGRYASYRWAI
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctgacgagaacagccgtgagctatcgcgactttggcgcgtgctgcgaaccaccaaa
cagatgtgttccgatcgaggttacgagctgaccgatgaagaatgcaacatttctctcgaa
gaattccgccagcaatacgcagacgagtccggcgcaccctcgcgagtcaagatggccttt
acagctcgaccttctgacgccatgatcaaaaagtacacgcccatccagcgaccggggcaa
gacgagaaaccgcccgagattggtactatccacgtcgagttctccaacgacgcaagcatc
ggcatcaagcaactgaagcaatttgcatcaaatctggcagacaagaattactacactgga
atctacgtatcgcaagtgcaaccaacttctgctgccctcaaaatcatcccgtctgtccat
ccgcttattatggaaattttcaaagaggatgatctgctggtcaatatcagccggcacgag
ctggtgcctaagcacattctcctgagccaagaggagaagcgcgggctacttgagcgatac
cgcctgaaggaaacgcagttgccgcgtatcagaatcgacgaccccatggcacgctatctc
ggtctgcgccgcgcacaggtcgtcaagatcattcggaaatcagaaaccgctggtcgatat
gcgagctacaggtgggcgatttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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