KEGG   Pseudocercospora fijiensis: MYCFIDRAFT_84506
Entry
MYCFIDRAFT_84506  CDS       T03109                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
pfj  Pseudocercospora fijiensis
Pathway
pfj03040  Spliceosome
pfj04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pfj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MYCFIDRAFT_84506
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MYCFIDRAFT_84506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfj03041]
    MYCFIDRAFT_84506
   04121 Ubiquitin system [BR:pfj04121]
    MYCFIDRAFT_84506
   03400 DNA repair and recombination proteins [BR:pfj03400]
    MYCFIDRAFT_84506
Enzymes [BR:pfj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     MYCFIDRAFT_84506
Spliceosome [BR:pfj03041]
 Complex B
  Other components
   Prp19 complex
    MYCFIDRAFT_84506
 Complex C
   Prp19-CDC5 complex
    MYCFIDRAFT_84506
Ubiquitin system [BR:pfj04121]
 Ubiquitin ligases (E3)
  U-box type E3
   MYCFIDRAFT_84506
DNA repair and recombination proteins [BR:pfj03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    MYCFIDRAFT_84506
SSDB
Motif
Pfam: Prp19 WD40 ANAPC4_WD40 eIF2A Cytochrom_D1 V_ATPase_I_N NBCH_WD40 U-box FixH zf-Nse DUF3450 Lactonase DUF6310 VID27 Ge1_WD40 VPS9
Other DBs
NCBI-GeneID: 19342205
NCBI-ProteinID: XP_007922907
JGI: 84506
UniProt: M2Z982
Position
Unknown
AA seq 481 aa
MLCAISGEAPEHPVASRKSGNVFERRLIEAYISEHGSDPVNGEELSADDLIDLKQARVVK
PRPPTLTSIPALLSTFQNEWDALILESYQLKQQLAETRQELSTALYYNDSAQRVIARLQK
ERDEARDALSRVSVTGAANGVNGANGDAMQVDSQALSEVALATIDETQARLSSTRRKRPV
PEDWATADEIQSYDIRSTVDTQFTGAKFLASDQSGDFFLTGDSDGTMGVYDLSQGTFTTR
TSLSAGAILGGAWAHDKQALSTSSGAVVVAQDGAIKGKFQQHAGAATAVAGHPSGKLLVS
VGYDKSYIIYDLDSMKVLTQVYGDIELTTVAFHPDGHLLAAGGSDGSVRLYDVKTSQLAH
TFPAPSAATPVIALTFSENGTWIASANQGQNILTVWDLRKLNALKTIDIGSAVTGIAWDY
TGQYLAAGGPGGIVVSQYSKSNKSWNEPLRRAVNVADVKWGAKAKSLVALTGEGAVSVIG
S
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgttgtgcgcaatctccggcgaagcgccagagcatcctgtcgcaagccgaaagtccggc
aatgtctttgagagacgactgatcgaagcttacatctctgagcatggctccgatcccgtc
aacggagaagagctttcggcggatgacttgatcgatctcaagcaagcgcgcgttgtgaag
cccagaccgccgaccctcacctcaattccagccctcctctcgacctttcaaaacgaatgg
gatgcgcttatcctggaatcctatcagctcaagcagcagctggcagaaactagacaagag
ctgagcactgctctttactacaacgattctgcgcaaagggttatcgcgcgtctgcaaaag
gagagagacgaggctcgagatgcgctttcgagagtgtctgtcactggtgctgcgaatggc
gtaaatggtgcaaatggagatgccatgcaggtagatagccaggctctctcagaagtggcg
cttgcgaccatcgatgagacacaggcacgactttcttccactcggcgcaagaggcctgta
ccggaagactgggcgaccgccgacgagatacaatcttacgacatcagatctactgtggac
acgcaattcacaggcgccaagttcctcgcttcggaccagtctggagactttttcctcacg
ggagactcagatggcacaatgggcgtctatgatctctctcaaggcactttcactactcga
acaagtctcagcgccggcgcgatccttggtggtgcttgggctcacgataagcaagcctta
tctacctcttctggtgctgttgtagtcgcccaggatggtgcgattaagggcaagtttcag
cagcacgcaggtgcagctacggcggtagcaggacatcccagtggcaaacttttggtctcc
gttggctatgacaagagctacatcatctacgaccttgactccatgaaagttcttacacag
gtatacggtgatattgaacttaccaccgttgcgtttcaccctgatggccaccttttggca
gctggaggatcggatggttccgtgcgactttacgacgtcaagacttcacagctggcgcac
acattcccagcaccctctgctgcaacaccagtcatcgccctgacgttctcagaaaatggc
acatggatcgcttcggcgaaccaaggccagaacatacttacagtttgggacttgaggaaa
ctcaatgcgcttaagaccatcgacattgggtcagcggtcactggcattgcttgggactac
acaggtcaatatctcgcagcaggcggacctggtgggatcgtggtatcacagtactcgaag
agcaacaagtcttggaatgagccgctgcgcagagccgtgaatgttgcagacgtcaaatgg
ggcgccaaggcaaaaagtctggtagcgctgactggcgagggagctgtcagcgtcatcggc
tcataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (33)   

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