KEGG   Pseudomonas frederiksbergensis: PFAS1_06165
Entry
PFAS1_06165       CDS       T04786                                 
Name
(GenBank) formate dehydrogenase subunit alpha
  KO
K00123  formate dehydrogenase major subunit [EC:1.17.1.9]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk00630  Glyoxylate and dicarboxylate metabolism
pfk00680  Methane metabolism
pfk01100  Metabolic pathways
pfk01120  Microbial metabolism in diverse environments
pfk01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PFAS1_06165
  09102 Energy metabolism
   00680 Methane metabolism
    PFAS1_06165
Enzymes [BR:pfk01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.1  With NAD+ or NADP+ as acceptor
    1.17.1.9  formate dehydrogenase
     PFAS1_06165
SSDB
Motif
Pfam: Molybdopterin Molydop_binding Fer2_4 NADH-G_4Fe-4S_3 Molybdop_Fe4S4 Fer4_7 Fer4 Fer4_21 Fer4_10 Fer4_9 Fer4_6 Fer4_2 Fer4_18 Fer4_4 Fer4_16 Fer4_13
Other DBs
NCBI-ProteinID: APV38942
UniProt: A0A1P8ES78
Position
1283535..1286417
AA seq 960 aa
MITLFDPNTDIDLGTPARDSDVQVTLNIDGRSISVPEGTSVMRAAALLGTTIPKLCATDS
LEAFGSCRMCLVEIDGMRGYPASCTTPVTEGMTVHTQTPKLATLRRNVMELYISDHPLDC
LTCSANGNCELQTVAGQVGLREVRYGYEGENHLADVKDTSNPYFDYDPSKCIVCNRCVRA
CEETQGTFALTITGRGFESRVEAAGGENFLDSECVSCGACVQACPTATLMEKSVVELGQP
ERSVITTCAYCGVGCSFRAEMKGDQLVRMVPDKNGQANHGHSCVKGRFAWGYATHPDRIT
TPMIRKNITDPWQEVSWDEAVTYAASEFRRLQQKYGRDSIGGITSSRCTNEETYLVQKLV
RAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVILVMGANPSDAHPVF
ASQLKRRLREGARLIVIDPRRIDLVDSVHARAELHLALRPGTNVAMLNALAHVIVTEGLL
NQPFIDARCEGTDFAHWSEFVSRAENSPEVLGAICGVDPANIRAAARLYATGGNAAIYYG
LGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYRH
ISNEVVRAEFEQAWNVTLQPDPGLRIPNMFEAALSGSFKGLYCQGEDIAQSDPNTQHVTA
ALSAMECIVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMDPLGGKAD
WEGTVALANALGYPMNYAHPSEIMDEIASLTPTFTNVSYAELDRHGSLQWPCNAAAPDGT
PTMHIEEFVRGKGRFMLTGYVPTEEKVNNRYPLLLTTGRILSQYNVGAQTRRTENVAWHD
EDRLEIHPTDAESRGINEGDWVGIGSRAGQTVLRARVTERVAPGVVYTTFHFPESGANVI
TTDNSDWATNCPEYKVTAVEVSRVYHPSEWQKRYQEFSDNQHRLLDERRKARGTKAEVRR
NT seq 2883 nt   +upstreamnt  +downstreamnt
atgattactctcttcgacccaaacaccgatatcgacctgggcaccccggcccgcgacagc
gacgtgcaggtgaccctgaacatcgacggccgcagcatcagcgtgcccgaaggcacctcg
gtgatgcgcgccgctgcgctgctgggcaccaccattccgaaactgtgtgccaccgacagc
ctggaagccttcggctcctgccgcatgtgcctggtggagatcgacggcatgcgcggctac
cccgcgtcctgcaccacgccggtcaccgaaggcatgaccgtgcacacgcagacgccgaaa
ctcgccacgctgcgccgcaacgtcatggagctgtacatctccgatcacccgctggattgc
ctgacctgctcggccaacggcaactgcgagctgcaaaccgtcgctggccaagttggtctg
cgggaagtgcgttacggctatgaaggcgagaaccatctcgccgacgtgaaggacacctcc
aacccgtatttcgattacgacccgagcaaatgcatcgtctgcaaccgctgcgtgcgcgcc
tgcgaagaaacccagggcacctttgccctgaccatcaccgggcgcggttttgaatcccgc
gttgaggccgccggtggcgagaacttcctcgactcggaatgcgtgtcctgcggcgcttgt
gtgcaagcctgcccgaccgcgaccctgatggaaaaaagcgtggtcgaactgggccagccc
gaacgcagcgtgatcaccacctgtgcctattgcggcgtgggttgctcgttccgcgccgag
atgaaaggcgaccagttggtgcgcatggttccggacaagaatggccaggccaaccacggc
cactcctgcgtcaaagggcgctttgcctggggctacgccacccacccggatcgcatcacc
acaccgatgatccgcaaaaacatcaccgacccttggcaggaagtcagctgggatgaagcg
gtgacctacgccgccagcgaattccgtcggttgcagcagaaatacggccgcgactcgatt
ggtggcatcacctccagccgttgcaccaacgaagaaacctacctggtgcaaaaactggtg
cgcgccgcgttcggcaacaacaacgtcgacacctgtgcgcgggtctgccactcgccgacc
ggctatggcctgaaacaaacccttggcgagtccgccggcacccagagtttcgattcggtg
atgcaggccgacgtgatcctggtgatgggcgccaaccccagcgacgcccacccggtgttc
gcttcccaactcaaacgccgcttgcgtgaaggcgcgcggctgatcgtcatcgacccacgc
cgcattgatctggtggactcggtgcatgctcgcgccgaattgcacctggccctgcgcccg
ggcaccaacgtcgccatgctcaatgccctggcccacgtcatcgtcaccgaaggtctgctc
aatcagcccttcatcgacgcccgttgcgaaggcacggatttcgcccactggagcgagttc
gtcagccgcgcggaaaactcgccggaagtcctcggcgccatctgcggcgtagaccctgcc
aacatccgcgccgccgctcgcctgtatgccactggcggcaacgcggcgatctattacggc
ctgggcgtcaccgagcacagccagggcagcaccgccgtcatgggcatcgccaacctggcc
atggccaccggcaacattggccgcgaaggcgtgggcgtgaacccgctgcgtgggcagaac
aacgttcagggctcctgcgacatgggctccttcccccacgaactgcccggctaccgccac
atctccaacgaggtcgttcgcgcagaattcgaacaggcctggaacgtcaccctgcaaccc
gacccgggcctgcgcattcccaacatgttcgaggcagcgttgagcggcagcttcaagggc
ttgtattgccaaggtgaagacatcgcccagagcgacccgaatacccaacacgtcaccgca
gccctgtccgccatggaatgcatcgtggtgcaggacattttcctcaacgaaaccgccaag
ttcgcccacgtgttcctgccgggcagttcgtttctggaaaaagacggcaccttcaccaac
gccgaacgacgcatctcccgggtgcgcaaggtcatggaccctctgggcggcaaggccgac
tgggaaggcaccgtggccctggccaacgccctgggctacccgatgaactacgcgcatcca
tcagaaatcatggatgaaatcgccagcctgacgccgacctttaccaacgtcagctacgcc
gaactggatcgccacggcagcctgcaatggccgtgcaacgccgcggcaccggacggcacg
ccgaccatgcacatcgaggagttcgtgcgcggcaaggggcgcttcatgctcaccggctac
gtgcccaccgaggagaaggtcaacaatcgctatccgctgctgctgaccaccgggcgcatc
ctcagccagtacaacgtcggcgctcagacccggcgtaccgagaacgttgcctggcacgac
gaagaccgtctggaaatccacccgaccgacgccgagagtcgtggcatcaacgaaggtgac
tgggtcggcatcggcagccgcgccggccagaccgtactgcgtgcgcgggtcaccgaacgg
gtcgccccgggcgtggtgtacaccacgttccacttccctgaatcgggggccaacgtgatc
accaccgacaactccgactgggccaccaactgtccggagtacaaggtcacggccgtggaa
gtcagccgcgtctatcacccgtccgagtggcaaaaacgctatcaggagttcagtgacaac
caacaccgcctgctcgacgaacgccgtaaggcgcgtggcactaaagccgaggtacgccga
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (35)   

Download RDF
DBGET integrated database retrieval system