KEGG   Pseudomonas protegens Pf-5: PFL_5703
Entry
PFL_5703          CDS       T00249                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pfl  Pseudomonas protegens Pf-5
Pathway
pfl03030  DNA replication
pfl03430  Mismatch repair
pfl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFL_5703
   03430 Mismatch repair
    PFL_5703
   03440 Homologous recombination
    PFL_5703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfl03032]
    PFL_5703
   03400 DNA repair and recombination proteins [BR:pfl03400]
    PFL_5703
Enzymes [BR:pfl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFL_5703
DNA replication proteins [BR:pfl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PFL_5703
DNA repair and recombination proteins [BR:pfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PFL_5703
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AAY94893
UniProt: Q4K4S2
Position
6501451..6502158
AA seq 235 aa
MSLFAWFRPAVSLLSAEQQQRRDRLPAFTELNESSLREQRWVVVDVETTGLNLNRDQVLS
IGAVVIEDGAIDFSQQFERTLQRQGHKLSPSVLIHGLGPSAIAAGCDPVEALLDFMEFVG
DSPLLAFHAPFDQHMLGRALKDSLGYRLQHSFLDVADMAPLLCPQAQIREAGLDDWVRWF
NLQVVERHNAAADALATAELALILFNRARQQQIHSPLNLQQRLGQWKRRQQAPSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgtttgcctggttccgccccgcagtcagcctgctgagtgccgagcagcaacag
cgtcgcgatcggctaccggccttcaccgagctgaatgaaagcagcctgcgagagcagcgc
tgggtagtggtggacgtggaaaccaccggcctcaacctcaaccgcgaccaggtgctgtcc
attggcgcggtggtgatcgaagacggtgccatcgacttcagccagcagttcgagcgcacc
ctgcaacgccagggccacaagctcagccccagcgtactgatccacggcctggggcccagc
gccatcgccgccggctgtgatccggtggaggccctgctggatttcatggagttcgtcggc
gacagcccgctgctggcctttcatgccccgttcgaccagcacatgctcggccgggcgctg
aaggacagcctgggctaccgcctgcaacacagcttcctcgatgtagcggacatggcgccg
ttgctgtgcccccaggcccagatccgcgaagccgggctggacgactgggtgcgctggttc
aacctgcaagtggtggagcggcataacgcggcggccgatgccctggccaccgcggagctg
gcgctgatcctgttcaaccgcgcccgccagcagcagatccacagcccgctgaacctgcaa
cagcgcctgggccagtggaaacgccggcagcaggcaccttcgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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